Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_C24
(899 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0743 + 6676906-6677007,6677160-6677226,6678246-6678529 71 1e-12
05_01_0065 + 461182-461271,462222-462288,462408-462664 68 1e-11
02_05_0137 - 26181793-26182055,26182172-26182238,26182392-26182478 66 4e-11
01_07_0340 + 42851330-42851413,42852179-42852245,42852336-42852592 64 1e-10
08_02_0958 - 23044708-23046045,23046131-23046363,23047059-230471... 60 2e-09
08_02_0956 + 23026108-23027146,23027255-23027395,23029334-230295... 60 2e-09
02_05_0889 - 32532495-32533832,32533919-32534151,32534321-325344... 57 2e-08
09_02_0530 + 10285844-10287217 39 0.005
07_01_0887 + 7380332-7380370,7381286-7381640,7382752-7382886,738... 36 0.033
09_02_0511 - 10079180-10079355,10079656-10079722,10080144-100801... 36 0.044
06_01_0910 - 7016932-7017759,7018059-7018351,7018952-7019390 30 2.9
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 28 8.8
>12_01_0743 + 6676906-6677007,6677160-6677226,6678246-6678529
Length = 150
Score = 71.3 bits (167), Expect = 1e-12
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Frame = +1
Query: 94 YTRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVD-NAGSDASECFHEVGHSE 270
++ ++V + K ++I VYDV FLEDHPGG +VL+ +A DA+E F +VGHS
Sbjct: 13 FSASDVVGHASRKDCWVVIHGKVYDVTKFLEDHPGGEDVLLHASASGDATEAFEDVGHST 72
Query: 271 IAIEWRNTFKVGEIVDEEKLEVKCKQPSAAESAEPLTLGGLLAVYGPPVAMAVLAYLLYT 450
AI N + +G I D + + + P + GPP L +LL
Sbjct: 73 SAISMMNNYLIGSIKDYVPPSAS-EATTIGGNDVPPNFRRMPQKKGPPAPNTFLDFLLPL 131
Query: 451 FLFG 462
F+ G
Sbjct: 132 FVLG 135
>05_01_0065 + 461182-461271,462222-462288,462408-462664
Length = 137
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = +1
Query: 94 YTRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEI 273
YT EVA ++ +II VY+V+ FLEDHPGG +VL+ + G DA++ F +VGHS
Sbjct: 9 YTLEEVAKHNSKDDCWLIIGGKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTT 68
Query: 274 AIEWRNTFKVGEI 312
A + + VG+I
Sbjct: 69 ARAMMDEYYVGDI 81
>02_05_0137 - 26181793-26182055,26182172-26182238,26182392-26182478
Length = 138
Score = 66.1 bits (154), Expect = 4e-11
Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Frame = +1
Query: 94 YTRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEI 273
Y+ EV+ ++ K +II VYDV+ F+E+HPGG EVL+ G DA+ F+++GH+
Sbjct: 8 YSFQEVSKHNDRKDCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFNDIGHTAT 67
Query: 274 AIEWRNTFKVGEIVDEEKLEVKCKQPSAAE--SAEP--LTLGGLLAV--YGPPVAMAVLA 435
A E + +GE VD + K +E SA+P + G L PV + LA
Sbjct: 68 AKELMPQYCIGE-VDASTVPAKPAYRVVSEDASAKPDAASQGAWLTALQLAVPVVLLGLA 126
Query: 436 YLLYTF 453
Y L F
Sbjct: 127 YALQDF 132
>01_07_0340 + 42851330-42851413,42852179-42852245,42852336-42852592
Length = 135
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +1
Query: 79 MSVHKYTRAEVAARDNNKQNL-IIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHE 255
MS +K E ++ N K + +II VY+V FLEDHPGG +VL+ + DA++ F +
Sbjct: 1 MSNNKVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 60
Query: 256 VGHSEIAIEWRNTFKVGEIVDEEKLEVKCK 345
VGHS A + + VG+I D + K K
Sbjct: 61 VGHSTTARAMMDEYYVGDI-DATTIPTKVK 89
>08_02_0958 -
23044708-23046045,23046131-23046363,23047059-23047199,
23047296-23048334
Length = 916
Score = 60.5 bits (140), Expect = 2e-09
Identities = 27/75 (36%), Positives = 47/75 (62%)
Frame = +1
Query: 91 KYTRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSE 270
++T +EV + I++ VYD AFL+DHPGG + ++ NAG+D +E F + HS+
Sbjct: 543 QFTMSEVRKHSSQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAI-HSD 601
Query: 271 IAIEWRNTFKVGEIV 315
A +T+++GE++
Sbjct: 602 KAKALLDTYRIGELI 616
>08_02_0956 +
23026108-23027146,23027255-23027395,23029334-23029566,
23029652-23030989
Length = 916
Score = 60.5 bits (140), Expect = 2e-09
Identities = 27/75 (36%), Positives = 47/75 (62%)
Frame = +1
Query: 91 KYTRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSE 270
++T +EV + I++ VYD AFL+DHPGG + ++ NAG+D +E F + HS+
Sbjct: 543 QFTMSEVRKHSSQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAI-HSD 601
Query: 271 IAIEWRNTFKVGEIV 315
A +T+++GE++
Sbjct: 602 KAKALLDTYRIGELI 616
>02_05_0889 -
32532495-32533832,32533919-32534151,32534321-32534461,
32534564-32535521
Length = 889
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +1
Query: 91 KYTRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSE 270
+YT +EV + II+ VYD FL+DHPGG + ++ NAG+D +E F + HS+
Sbjct: 515 QYTMSEVRRHTTPESAWIIVHGHVYDCTGFLKDHPGGADSIMINAGTDCTEEFDAI-HSD 573
Query: 271 IAIEWRNTFKVGEIV 315
A +++GE++
Sbjct: 574 KARGLLEMYRIGELI 588
>09_02_0530 + 10285844-10287217
Length = 457
Score = 39.1 bits (87), Expect = 0.005
Identities = 35/120 (29%), Positives = 46/120 (38%)
Frame = +1
Query: 85 VHKYTRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGH 264
V + E+ A + I I VYDV A++ HPGG L+ AG DA++ F H
Sbjct: 16 VRMISSEELRAHASRDDLWISISGDVYDVTAWVPHHPGGDIPLLTLAGQDATDAF-AAYH 74
Query: 265 SEIAIEWRNTFKVGEIVDEEKLEVKCKQPSAAESAEPLTLGGLLAVYGPPVAMAVLAYLL 444
A F VG + E V L+ GL GP + V LL
Sbjct: 75 PPSARPLLGRFLVGRL---EDYTVSPASADFRRLLAQLSSAGLFERVGPTPKVQVAGMLL 131
>07_01_0887 +
7380332-7380370,7381286-7381640,7382752-7382886,
7383029-7383138
Length = 212
Score = 36.3 bits (80), Expect = 0.033
Identities = 16/53 (30%), Positives = 34/53 (64%)
Frame = +1
Query: 145 IIDNVVYDVAAFLEDHPGGTEVLVDNAGSDASECFHEVGHSEIAIEWRNTFKV 303
++ VY++A +++ HPGG ++L+ AG D++ F + + + +++TFKV
Sbjct: 159 VLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALFSIL----LLLLFKHTFKV 207
>09_02_0511 -
10079180-10079355,10079656-10079722,10080144-10080181,
10080255-10080336
Length = 120
Score = 35.9 bits (79), Expect = 0.044
Identities = 14/25 (56%), Positives = 22/25 (88%)
Frame = +1
Query: 157 VVYDVAAFLEDHPGGTEVLVDNAGS 231
+VYDV +++E+HPGG E+L +NAG+
Sbjct: 40 MVYDVTSYVEEHPGGDEIL-NNAGA 63
>06_01_0910 - 7016932-7017759,7018059-7018351,7018952-7019390
Length = 519
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 46 WSVRRVRRACIMSVHKYTRAEVAARDNNKQNLIIIDNVVYDVAAFLEDHPG 198
W +RRV+R +M V K T A AA N + ++D V + + HPG
Sbjct: 420 WELRRVQREEVMRV-KETAAAAAAASGNARRFEVLD-VTKAMMLRADGHPG 468
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 334 VKCKQPSAAESAEPLTLGGLLAVYGPPVAMAVLAYLLYTFL 456
+KCK A E+A+PL + + PP AM V +L+T L
Sbjct: 8 IKCKAAVAWEAAKPLVIEEV--EVAPPQAMEVRVKILFTSL 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,991,281
Number of Sequences: 37544
Number of extensions: 297311
Number of successful extensions: 885
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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