Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_C23
(925 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 125 2e-27
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 109 1e-22
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 104 4e-21
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 100 1e-19
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 98 3e-19
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 96 1e-18
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 93 1e-17
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 93 1e-17
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 92 2e-17
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 88 3e-16
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 83 1e-14
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 82 2e-14
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 78 4e-13
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 69 2e-10
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 68 4e-10
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 67 5e-10
UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 60 1e-07
UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 50 8e-05
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 41 0.039
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 40 0.090
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.21
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 39 0.21
UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 37 0.84
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 36 1.9
UniRef50_A0LE03 Cluster: Serine/threonine protein kinase; n=1; M... 35 3.4
UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga ... 34 4.5
UniRef50_UPI0000E49D21 Cluster: PREDICTED: similar to LOC495497 ... 34 5.9
UniRef50_Q1RS46 Cluster: Polyketide synthase type I; n=3; Bacill... 34 5.9
UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2; Sulfol... 34 5.9
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 125 bits (301), Expect = 2e-27
Identities = 66/104 (63%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = +1
Query: 388 PVRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQ 564
P RRNKS ESLQ NVQR+KEYR++LILFP K KG+++ EE KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 565 PAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAA 696
K AR ITE+EKNFKA+ LR AR+ A+L GIRAKR K+AA
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAA 203
Score = 124 bits (298), Expect = 4e-27
Identities = 56/89 (62%), Positives = 65/89 (73%)
Frame = +3
Query: 126 HFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRA 305
HFHKDWQR V TWFNQPAR+ RR++ R +RPIVRCPTVRYHTKVRA
Sbjct: 13 HFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRA 72
Query: 306 GRGFTLREIRAAGLNPVFARTIGIAVDPR 392
GRGF+L E+R AG++ ARTIGI+VDPR
Sbjct: 73 GRGFSLEELRVAGIHKKVARTIGISVDPR 101
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 109 bits (262), Expect = 1e-22
Identities = 50/100 (50%), Positives = 66/100 (66%)
Frame = +3
Query: 93 MGKGXHXIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 272
M + + IPNGHFHK WQ+ VK WFNQP ++ RRK R LRP+V C
Sbjct: 1 MVRHNNMIPNGHFHKKWQQKVKLWFNQPMKKLRRKALRAKKSRQLAPKPTEL-LRPLVHC 59
Query: 273 PTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
P+ RY +KVRAGRGFT +E++ AG++ +AR+ G+AVDPR
Sbjct: 60 PSERYKSKVRAGRGFTFQELKQAGMSDKYARSFGVAVDPR 99
Score = 55.6 bits (128), Expect = 2e-06
Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +1
Query: 388 PVRRNKSVESLQINVQRIKEYRARLILFPKGK-KVLKGEANEEERKLATQLRGPLMPVQQ 564
P RRN+ ES+ N+QR+ EY++RLI P K KVLK + + L V+
Sbjct: 98 PRRRNRCTESIAANIQRLIEYKSRLIFLPDSKNKVLKIDDGKN-----------LNVVKV 146
Query: 565 PAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKR 681
K A + E+EK F+A+ LR AR K GIR KR
Sbjct: 147 VPGKVKALKVGEEEKKFEAFVTLRRARCDEKFAGIRMKR 185
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 104 bits (249), Expect = 4e-21
Identities = 48/98 (48%), Positives = 63/98 (64%)
Frame = +3
Query: 99 KGXHXIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 278
K + + N HF KDWQR VK WF+QP + RR+ R LRP VRCPT
Sbjct: 4 KHNNILHNNHFRKDWQRRVKVWFDQPGAKKRRRTAR-EAKAAKLGLRPVQLLRPAVRCPT 62
Query: 279 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
+RY+TK+R+GRGFT+ E++AAGL +AR++GI VD R
Sbjct: 63 LRYNTKIRSGRGFTIEEVKAAGLGKKYARSVGIPVDHR 100
Score = 65.7 bits (153), Expect = 2e-09
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +1
Query: 394 RRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 573
RRNKS ESL++NV+RIK Y+ARL++ PK K K + + A + ++P+
Sbjct: 101 RRNKSEESLKLNVERIKAYQARLVVIPKLTKKNKDKKVDLSNVEAVRQVQSVLPLPAGTE 160
Query: 574 KSVARPITEDEKNFKAYQYLRGARSIAKLVG-IRAKRLK 687
R IT +EK F AY+ LR AR + G ++A+ K
Sbjct: 161 AEKPRAITSEEKEFNAYETLRKARGTHRAAGKVKARIAK 199
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 99.5 bits (237), Expect = 1e-19
Identities = 47/98 (47%), Positives = 61/98 (62%)
Frame = +3
Query: 99 KGXHXIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 278
K + IP+ HF K WQ +VKTWFNQPAR+ RR+ R LRP+V T
Sbjct: 2 KHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQT 61
Query: 279 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
++Y+ KVRAG+GFTL E++ AG+ A TIGI+VD R
Sbjct: 62 LKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHR 99
Score = 80.6 bits (190), Expect = 5e-14
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = +1
Query: 394 RRNKSVESLQINVQRIKEYRARLILFPKGKKVLK-GEANEEERKLATQLRGPLMPVQQPA 570
R+N+S+E LQ NVQR+K Y+A+L++FP+ + +K G++ EE ATQ++G MP+
Sbjct: 100 RKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVK 159
Query: 571 PKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDA 693
+T D K FKAY +R R+ A+ G RAKR +A
Sbjct: 160 AAMELVKLTADLKAFKAYDKIRLERTNARHAGARAKRAAEA 200
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 97.9 bits (233), Expect = 3e-19
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = +3
Query: 129 FHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 308
FHKDWQR V+ F+QP R++RR++ R+ LRP+VRCPTV+Y+ +VR G
Sbjct: 31 FHKDWQRRVRVHFDQPGRKHRRREARLAKAAAVAPRPVDK-LRPVVRCPTVKYNRRVRVG 89
Query: 309 RGFTLREIRAAGLNPVFARTIGIAVDPR 392
RGFTL E++ AG+ ART+GIAVD R
Sbjct: 90 RGFTLAELKEAGIPKKLARTVGIAVDHR 117
Score = 48.8 bits (111), Expect = 2e-04
Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Frame = +1
Query: 394 RRNKSVESLQINVQRIKEYRARLILFPKGK---KVLKGEANEEERKLA-----------T 531
R N S ESL NV R+K+Y+ARLILFP+ K L A+E A T
Sbjct: 118 RVNYSKESLVANVARLKDYKARLILFPRKSGQFKKLDSSADEVNAAKAAFAAEGKTEGYT 177
Query: 532 QLRGPLMPVQQPAPKSVARPITEDE---KNFKAYQYLRGARSIAKLVGIRAKRLKDAA 696
G + P++ + + DE AY+ LR RS A+ GIR KR K A
Sbjct: 178 TKLGAIFPIKNISAAEAVTEVKRDELPKGEEAAYRRLRETRSEARYKGIREKRAKAKA 235
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 96.3 bits (229), Expect = 1e-18
Identities = 51/108 (47%), Positives = 61/108 (56%)
Frame = +3
Query: 69 PWXNSDVKMGKGXHXIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXX 248
PW ++M + IPN H K W VKT+F+ PAR RR+ R
Sbjct: 16 PWPF--LEMVAKNNQIPNDHLRKYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEG 73
Query: 249 XLRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
LRPIVRCPTVRY+ K R GRGFT +E+ AAG +P AR GIAVD R
Sbjct: 74 PLRPIVRCPTVRYNMKTRLGRGFTPKELVAAGFDPALARFQGIAVDAR 121
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 92.7 bits (220), Expect = 1e-17
Identities = 45/98 (45%), Positives = 61/98 (62%)
Frame = +3
Query: 99 KGXHXIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 278
K +PN H K W RFVKT++NQPA + RR+Q R LRP+VR T
Sbjct: 2 KHNQQLPNAHMRKHWTRFVKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQT 60
Query: 279 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
++Y++ + GRGF+L E++ AGLN FART+GI+VD R
Sbjct: 61 IKYNSVQKLGRGFSLIELKEAGLNAAFARTVGISVDHR 98
Score = 47.2 bits (107), Expect = 6e-04
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Frame = +1
Query: 394 RRNKSVESLQINVQRIKEYRARLILFPK--GKK---VLKGEANEEERKLATQLRGPLMPV 558
RRN + E L NV+R+K Y ++L+L+P+ GK V+K NE Q P +
Sbjct: 99 RRNLNQEELNNNVKRLKAYLSKLVLYPRVAGKPKNGVVKDSTNEVVAHPVAQNTNPEVLT 158
Query: 559 QQPAPK-SVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKR 681
Q PK A I+++ + Y+ LR AK VG++ KR
Sbjct: 159 FQRTPKREKATVISKELRAKNVYRRLRQEWYNAKFVGVKEKR 200
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 92.7 bits (220), Expect = 1e-17
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = +3
Query: 120 NGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 299
N HF K WQ V+ F+Q ++ R+Q+R+ LRP+VR PTV+Y+ KV
Sbjct: 11 NNHFRKHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKV 69
Query: 300 RAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
RAGRGFTL E++A G+ P +ARTIGI+VD R
Sbjct: 70 RAGRGFTLAELKAVGIAPKYARTIGISVDHR 100
Score = 63.7 bits (148), Expect = 6e-09
Identities = 40/101 (39%), Positives = 59/101 (58%)
Frame = +1
Query: 394 RRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 573
R+NKS E+ NV R++EY+++L++F K K + + E+ AT PV+QPAP
Sbjct: 101 RQNKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQVDVSAT------FPVEQPAP 154
Query: 574 KSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAA 696
+S R + E+ AY+ LR AR+ K GIR KR K+ A
Sbjct: 155 ESGLRAVEVPEQT--AYRTLRLARNEKKYKGIREKRAKEKA 193
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 92.3 bits (219), Expect = 2e-17
Identities = 46/95 (48%), Positives = 59/95 (62%)
Frame = +3
Query: 114 IPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHT 293
IPN H+HK+++R++KTW+NQP R+ R+ R LRPIV PT RY+
Sbjct: 7 IPNVHYHKNYKRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPTQRYNM 65
Query: 294 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR*T 398
K R GRGFTL E+ A G+N A +IGIAVD R T
Sbjct: 66 KTRLGRGFTLEELSACGINKKAAMSIGIAVDHRRT 100
Score = 47.6 bits (108), Expect = 4e-04
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Frame = +1
Query: 394 RRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKG-------EANEEERKLATQLRGPL 549
R + S E+ QINV R+K+Y ++L P KGKK KG A EE + L
Sbjct: 99 RTDLSEETFQINVDRLKKYINGIVLQPRKGKKTKKGFAGIPNDSAREEFKALKNVSHEKA 158
Query: 550 MPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAA 696
P++ IT +E+ F+A+ LR AK G +A + K +A
Sbjct: 159 FPIKAQTLAVKTHVITPEERKFRAFSTLRKQFIEAKNFGKKATKAKASA 207
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 88.2 bits (209), Expect = 3e-16
Identities = 49/106 (46%), Positives = 63/106 (59%), Gaps = 6/106 (5%)
Frame = +3
Query: 93 MGKGXHXIPNGHFHKDWQRF------VKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXL 254
M KG + IP+ H K W VK +FNQPA++ RR++ R+ L
Sbjct: 12 MPKGNNAIPHVHQRKHWNPCSSQKGNVKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-L 70
Query: 255 RPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
RP V CPTVRY+ K R GRGF+L E++AAG+ P +ARTIGI VD R
Sbjct: 71 RPQVNCPTVRYNMKRRLGRGFSLEELKAAGVKPRYARTIGIRVDRR 116
Score = 66.9 bits (156), Expect = 7e-10
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Frame = +1
Query: 394 RRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEEERKLATQLR-----GPLMP 555
R+NKS E + INVQR+K Y ++L+LFP KK KG+A EEE K ATQ R +
Sbjct: 117 RKNKSEEGMNINVQRLKTYMSKLVLFPLNRKKPQKGDATEEEVKAATQDRSRYGTAAVGG 176
Query: 556 VQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRL--KDAAXN 702
+ PA + R +TE+E K Y++L+ S + R +R K+A N
Sbjct: 177 LVTPA-REAPRKVTEEESTKKMYKFLKKNHSAVRFFRARNRRAARKEAKEN 226
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 83.0 bits (196), Expect = 1e-14
Identities = 42/93 (45%), Positives = 54/93 (58%)
Frame = +3
Query: 114 IPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHT 293
+PN H HK WQR+V+ FN+ +R +R+ R L P+V CPT RY+
Sbjct: 8 LPNVHLHKWWQRYVRVDFNKNIKRKQRRLLR-EKRRKQNGGTPIEKLHPVVHCPTQRYNY 66
Query: 294 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
K R G+GFTL EI+A L P AR+IGI VD R
Sbjct: 67 KTRLGKGFTLEEIKAVKLTPSAARSIGIIVDKR 99
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 81.8 bits (193), Expect = 2e-14
Identities = 41/88 (46%), Positives = 53/88 (60%)
Frame = +3
Query: 129 FHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 308
F KDW+ V TW QP R+ RR Q R+ L+P V C R++ K+R G
Sbjct: 12 FGKDWRSKVHTWVQQPFRKIRRHQTRVEKAKSVFPATIKS-LKPSVHCMNQRFNYKLRLG 70
Query: 309 RGFTLREIRAAGLNPVFARTIGIAVDPR 392
RGF+L+E+RAA ++ ARTIGIAVDPR
Sbjct: 71 RGFSLKELRAAKIDKNLARTIGIAVDPR 98
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 77.8 bits (183), Expect = 4e-13
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +3
Query: 252 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
+RPIVRCPTVRYHTKVR GRGF+L EIR AG++ ARTI I+VDP+
Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPK 59
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 68.9 bits (161), Expect = 2e-10
Identities = 44/135 (32%), Positives = 67/135 (49%)
Frame = +3
Query: 93 MGKGXHXIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 272
M K + + + H K RFVK NQ ++ RR+ R LRP+V
Sbjct: 1 MVKHNNMLSDVHRVKCSHRFVKPVLNQAGKKKRRRLAR-QRKAAASGLTPTGYLRPLVHM 59
Query: 273 PTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR*TQQVC*IIANQCSKNKGIQ 452
P+ RY+ K+R GRGFTL+E++ AGL AR++G+AVD R T + + ++ K
Sbjct: 60 PSRRYNYKLRFGRGFTLQELKVAGLGKKVARSVGVAVDHRRTNKCAESLNLNVNRLKTYL 119
Query: 453 SASYTVPERQKGAEG 497
S P ++ +G
Sbjct: 120 SKLVLFPRKKHAKKG 134
Score = 57.6 bits (133), Expect = 4e-07
Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Frame = +1
Query: 394 RRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA-------NEEERKLA--TQLRGP 546
R NK ESL +NV R+K Y ++L+LFP+ K KG A E+ R LA Q
Sbjct: 100 RTNKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKGFAGLPSDTPREKLRTLALTKQSVKK 159
Query: 547 LMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAK 657
+MPV Q K R +TE + + Y LR AR AK
Sbjct: 160 VMPVVQEFVKEPPREVTEKDTSVNVYHKLRVARKAAK 196
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 67.7 bits (158), Expect = 4e-10
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +3
Query: 123 GHFHKDWQRFVKTWFNQPARRY-RRKQNRIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKV 299
GHF K W+ V T FNQP + RRK + L+P+V+CPT ++TK+
Sbjct: 10 GHFRKKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKI 69
Query: 300 RAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
+ GRGF+++EI+ + + A + GI++D R
Sbjct: 70 KLGRGFSIQEIKKSMIKLKTATSYGISIDKR 100
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 67.3 bits (157), Expect = 5e-10
Identities = 38/98 (38%), Positives = 48/98 (48%)
Frame = +3
Query: 99 KGXHXIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRCPT 278
KG H +PN HF K + + P + R + LRPIVRCPT
Sbjct: 2 KGNHALPNNHFRKTSLKI--RIHHDPETKARVMAEKKLRKAKALFPMPLKKLRPIVRCPT 59
Query: 279 VRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
++Y+ R GRGFT E AGL+ AR +GIAVD R
Sbjct: 60 IKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLR 97
>UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 59.7 bits (138), Expect = 1e-07
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +3
Query: 114 IPNGHFHKDWQRFVKTWFNQPARRYRRK 197
+PN HFHKDWQR+VKTWFNQP R+ RR+
Sbjct: 12 LPNAHFHKDWQRYVKTWFNQPGRKLRRQ 39
>UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal
protein L13 isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L13 isoform 4 -
Canis familiaris
Length = 102
Score = 50.0 bits (114), Expect = 8e-05
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +3
Query: 126 HFHKDWQRFVKTWFNQPARRYRR 194
HFHKDWQR V TWFNQPAR+ RR
Sbjct: 13 HFHKDWQRRVATWFNQPARKIRR 35
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 41.1 bits (92), Expect = 0.039
Identities = 23/46 (50%), Positives = 24/46 (52%)
Frame = -1
Query: 367 VRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 230
VRA T S V P P R L YR VG TIGR+ PA GRG
Sbjct: 398 VRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 39.9 bits (89), Expect = 0.090
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +3
Query: 252 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGL 347
LRP+V T++Y+ KV +GFTL E++AAG+
Sbjct: 52 LRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 38.7 bits (86), Expect = 0.21
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 258 PIVRCPTVRYHTKVRAGRGFTLREIR 335
PIV+C T++Y+ K RAGRGF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 38.7 bits (86), Expect = 0.21
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +3
Query: 255 RPIVRCPTVRYH---TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
+P+V+ P H K + GRGF++ E+RA GL+ AR +GI VD R
Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDER 54
>UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 365
Score = 36.7 bits (81), Expect = 0.84
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +1
Query: 472 PKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLR 636
PKGKK K A EEE +A Q+ P+ PV K V ++E++K YQ L+
Sbjct: 297 PKGKKQKKKSAVEEEGSVAPQVAQPVKPVH--IDKFVRPTVSENKKPSSRYQILQ 349
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 35.5 bits (78), Expect = 1.9
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 297 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
VR GRGF+L E+ AGL+ AR +G+ VD R
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTR 54
>UniRef50_A0LE03 Cluster: Serine/threonine protein kinase; n=1;
Magnetococcus sp. MC-1|Rep: Serine/threonine protein
kinase - Magnetococcus sp. (strain MC-1)
Length = 1143
Score = 34.7 bits (76), Expect = 3.4
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +1
Query: 394 RRNKSVESLQINVQRIKEYRAR---LILFPKGKKVLKGEANEEERKLATQLRGPLM-PVQ 561
R N+ + LQ N +R + + R ++L P+ +++ A ER L+ P
Sbjct: 736 RVNRLEQRLQANKERYRTTQLRGDEMLLKPEAGEIIPNSAPPRERDEPFMASQNLITPAA 795
Query: 562 QPAPKSVARPITEDEKNFKA 621
PAP+S A + EDEKNF A
Sbjct: 796 PPAPRS-ASFLEEDEKNFTA 814
>UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L13 -
Caldivirga maquilingensis IC-167
Length = 144
Score = 34.3 bits (75), Expect = 4.5
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 294 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
K++ GRGF++ EI+A L AR +GI VD R
Sbjct: 17 KMKQGRGFSISEIKAINLTVNEARLLGIPVDTR 49
>UniRef50_UPI0000E49D21 Cluster: PREDICTED: similar to LOC495497
protein; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC495497 protein -
Strongylocentrotus purpuratus
Length = 802
Score = 33.9 bits (74), Expect = 5.9
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -3
Query: 344 SCGPNFTKSESSTGAYFSMVPNSWASHYRT*RPS-CRTWSYGLSFLYSILLSAVSSSWLV 168
SC P+ T S ST + P +H+ T P C WS+ SF Y A L
Sbjct: 367 SCPPSSTSS--STSSKQETPPCPVDNHFETGPPEKCHKWSFIFSFTYLAFFRAAGYFGLE 424
Query: 167 KP-SFNKSLPILVEMSI 120
KP SF+ + +L+ + +
Sbjct: 425 KPTSFSNVVQLLLTLKL 441
>UniRef50_Q1RS46 Cluster: Polyketide synthase type I; n=3;
Bacillus|Rep: Polyketide synthase type I - Bacillus
amyloliquefaciens
Length = 1917
Score = 33.9 bits (74), Expect = 5.9
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +1
Query: 427 NVQRIKEYRARLILF-----PKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARP 591
N +R+KEY ARL++F P+G L + + + +L LRG L V A SV
Sbjct: 895 NPERLKEYAARLLMFLKDEAPEGSGPLYDKIDTMQNQLEDALRGVLAEVLHVASGSV--- 951
Query: 592 ITEDEKNFKAY 624
+DE+++K +
Sbjct: 952 --DDEQDWKEF 960
>UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2;
Sulfolobus solfataricus|Rep: 50S ribosomal protein L13e
- Sulfolobus solfataricus
Length = 79
Score = 33.9 bits (74), Expect = 5.9
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 300 RAGRGFTLREIRAAGLNPVFARTIGIAVDPR 392
R GRGF++ E+ AGLN AR +GI VD R
Sbjct: 25 RIGRGFSVGELEKAGLNINKARKLGIFVDIR 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,736,604
Number of Sequences: 1657284
Number of extensions: 13751665
Number of successful extensions: 34571
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 33499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34541
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84851082477
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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