Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C18
         (1056 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4X6Z3 Cluster: Putative uncharacterized protein; n=1; ...    36   1.8  
UniRef50_A4H3R8 Cluster: Putative uncharacterized protein; n=2; ...    36   2.3  
UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1; ...    35   3.1  

>UniRef50_Q4X6Z3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 120

 Score = 35.9 bits (79), Expect = 1.8
 Identities = 20/41 (48%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = -2

Query: 827 FFFFXXGGGXFFFFX--XPPPPXXXXXXXXG-GGGGXXFFF 714
           F F   GGG FFFF    PPPP        G  GGG  FFF
Sbjct: 6   FSFSPGGGGGFFFFCGKPPPPPLFFFSPFLGKKGGGDNFFF 46


>UniRef50_A4H3R8 Cluster: Putative uncharacterized protein; n=2;
            Leishmania braziliensis|Rep: Putative uncharacterized
            protein - Leishmania braziliensis
          Length = 2825

 Score = 35.5 bits (78), Expect = 2.3
 Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
 Frame = -2

Query: 875  PXFFFFXXPXXXXXXXFFFFXXGGG--XFFFFXXPPPPXXXXXXXXGGGGGXXFFF 714
            P FFFF  P       FFF    GG   FFFF  P              GG  FFF
Sbjct: 1791 PFFFFFKCPAGGAPFFFFFRCTAGGAPFFFFFKCPAGGAPFFFFFKCTAGGAPFFF 1846



 Score = 34.3 bits (75), Expect = 5.4
 Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
 Frame = -2

Query: 875  PXFFFFXXPXXXXXXXFFF-FXXGGGXFFFFXXPP---PPXXXXXXXXGGGGGXXFFF 714
            P FFFF  P       FFF    GG  FFFF   P    P          GG   FFF
Sbjct: 1817 PFFFFFKCPAGGAPFFFFFKCTAGGAPFFFFFRGPAGGAPFFFFFKCPAVGGPLFFFF 1874


>UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 159

 Score = 35.1 bits (77), Expect = 3.1
 Identities = 24/65 (36%), Positives = 24/65 (36%), Gaps = 11/65 (16%)
 Frame = -2

Query: 869 FFFFXXPXXXXXXXFFFFXXGGGXFFFFX--XPPPP---------XXXXXXXXGGGGGXX 723
           FFF           FFFF   G   FFF    PPPP                 GGGGG  
Sbjct: 35  FFFSKKKKKRGCLFFFFFFPRGEKIFFFGGGAPPPPPPLKKKKKIFFFFFKKRGGGGGFF 94

Query: 722 FFFXP 708
           FFF P
Sbjct: 95  FFFPP 99


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,527,595
Number of Sequences: 1657284
Number of extensions: 8472697
Number of successful extensions: 9070
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8768
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 102062831750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)