Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C17
         (940 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical...    33   0.22 
Z71258-2|CAA95781.2|  668|Caenorhabditis elegans Hypothetical pr...    32   0.51 
Z46934-6|CAA87045.3|  371|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AF016418-10|AAK18896.1|  611|Caenorhabditis elegans Hypothetical...    30   2.1  
Z81032-5|CAL36491.1|  597|Caenorhabditis elegans Hypothetical pr...    29   6.3  
Z81032-2|CAD88213.1|  558|Caenorhabditis elegans Hypothetical pr...    29   6.3  
Z81032-1|CAB02719.1|  535|Caenorhabditis elegans Hypothetical pr...    29   6.3  
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ...    28   8.4  
AL032626-18|CAA21543.2|  458|Caenorhabditis elegans Hypothetical...    28   8.4  

>AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical
           protein F40G9.1 protein.
          Length = 636

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +1

Query: 538 PLGWTALMVAAANDKPDVVRELIKL 612
           PLGWT LM+A++  + DVVR L+ L
Sbjct: 478 PLGWTPLMIASSAGRVDVVRYLLTL 502


>Z71258-2|CAA95781.2|  668|Caenorhabditis elegans Hypothetical
           protein C01H6.2 protein.
          Length = 668

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = +1

Query: 427 AQIGNVEELKRQAEYLIAKESQQPKKD---DEGGPVDRRHPLGWTALMVAAANDKPDVVR 597
           A I  V  L   A +  A+E +    D     G   ++   LG TAL +A A    DVVR
Sbjct: 73  ANIHAVNHLGMTAYHYAAREGKLAVLDTLMQRGASKNQTTALGVTALTLACAGGHADVVR 132

Query: 598 ELIKLGGQT 624
            LI++  +T
Sbjct: 133 RLIRISNET 141


>Z46934-6|CAA87045.3|  371|Caenorhabditis elegans Hypothetical
           protein ZK1320.7 protein.
          Length = 371

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = +1

Query: 415 FFRAAQIGNVEELKRQAEYLIAKESQQPKKDDEGGPVDRRHPLGWTALMVAAANDKPDVV 594
           F +AA+ GN+EE+KR  E  I              P+D     GWTA M AA     +V 
Sbjct: 119 FLKAAKDGNLEEIKRYLEKKI--------------PIDVTDFYGWTATMCAAGEGNFEVC 164

Query: 595 RELIKLG 615
           + L++ G
Sbjct: 165 KLLLEHG 171


>AF016418-10|AAK18896.1|  611|Caenorhabditis elegans Hypothetical
           protein C49G7.1 protein.
          Length = 611

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = +1

Query: 514 GGPVDRRHPLGWTALMVAAANDKPDVVRELIKLG 615
           G  VD  +  G TAL VA  N +PD+V+ LIK G
Sbjct: 295 GAFVDVYNKFGNTALHVATKNAQPDLVKLLIKHG 328


>Z81032-5|CAL36491.1|  597|Caenorhabditis elegans Hypothetical
           protein C02F4.2c protein.
          Length = 597

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 542 SAGLRSWSRPPTTNPTSSANLSNSGAKPDLQE 637
           SAG  S ++P TTN T++A+ +N   + DL++
Sbjct: 5   SAGQNSAAKPDTTNTTTTASNNNRERERDLKQ 36


>Z81032-2|CAD88213.1|  558|Caenorhabditis elegans Hypothetical
           protein C02F4.2b protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 542 SAGLRSWSRPPTTNPTSSANLSNSGAKPDLQE 637
           SAG  S ++P TTN T++A+ +N   + DL++
Sbjct: 5   SAGQNSAAKPDTTNTTTTASNNNRERERDLKQ 36


>Z81032-1|CAB02719.1|  535|Caenorhabditis elegans Hypothetical
           protein C02F4.2a protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 542 SAGLRSWSRPPTTNPTSSANLSNSGAKPDLQE 637
           SAG  S ++P TTN T++A+ +N   + DL++
Sbjct: 5   SAGQNSAAKPDTTNTTTTASNNNRERERDLKQ 36


>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
           protein Y53C10A.9 protein.
          Length = 1564

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 502 SLVADFL*Q*GIPLAFLTLRHFLFGLL*KTF 410
           S V  +L   G+PL    L HFLFG++  TF
Sbjct: 223 SSVKPYLTTIGLPLWMFYLEHFLFGVIKNTF 253


>AL032626-18|CAA21543.2|  458|Caenorhabditis elegans Hypothetical
           protein Y37D8A.22 protein.
          Length = 458

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 320 LSFPELLYPEDIRCAATPASRAV 252
           L FP+  YPE I+C +T +S AV
Sbjct: 166 LDFPQPPYPESIQCPSTKSSIAV 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,194,014
Number of Sequences: 27780
Number of extensions: 313708
Number of successful extensions: 1001
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)