Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C16
         (893 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           27   0.20 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        25   0.61 
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            23   2.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.4  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   7.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.5  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   7.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   7.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   7.5  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +3

Query: 396 PVSSPKLVIAEEKQTSTTVMEHNVSQLNQVTSTHITNF-GTPKGELSKTLPGPSKPSLKQ 572
           P++SP +       TS T      S    +T+ ++    G  +  L + LP P +PS + 
Sbjct: 94  PLASPLVQEPGSSTTSATSGAVMASPPMPITTDNVAAISGVLRSLLDRPLPAPERPSFEG 153

Query: 573 VKNLNTNK 596
           +K  N  K
Sbjct: 154 LKRQNPVK 161


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 74  QNLPSKGIPMSLTHSNIFPGITSRPLTAGINSVRLSSPNTINQVKL 211
           QNL   GI    T+ N    +T++      N+V +  PN+ N  K+
Sbjct: 365 QNLSQSGINYKDTNDNNVSAVTTQHQGYPTNTVTILGPNSGNTPKI 410


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 74  QNLPSKGIPMSLTHSNIFPGI 136
           QN P  G PM + H    PG+
Sbjct: 90  QNTPPAGYPMDVPHGMGSPGV 110


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 74  QNLPSKGIPMSLTHSNIFPGI 136
           QN P  G PM + H    PG+
Sbjct: 90  QNTPPAGYPMDVPHGMGSPGV 110


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 487 VT*FNWLTLCSITVVLVCFSSAMT 416
           VT  +W  +C+   +L+C S A T
Sbjct: 236 VTVISWQAVCTFYNILLCDSVAHT 259


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 130 WKNIAMCQRHWDPF*WQILLLCQICY 53
           W  IA       PF +  + LC +CY
Sbjct: 277 WTRIAYMALASVPFIFDSIHLCDVCY 302


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 487 VT*FNWLTLCSITVVLVCFSSAMT 416
           VT  +W  +C+   +L+C S A T
Sbjct: 236 VTVISWQAVCTFYNILLCDSVAHT 259


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 487 VT*FNWLTLCSITVVLVCFSSAMT 416
           VT  +W  +C+   +L+C S A T
Sbjct: 556 VTVISWQAVCTFYNILLCDSVAHT 579


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 130 WKNIAMCQRHWDPF*WQILLLCQICY 53
           W  IA       PF +  + LC +CY
Sbjct: 295 WTRIAYMALASVPFIFDSIHLCDVCY 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,094
Number of Sequences: 336
Number of extensions: 4334
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)