Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C16
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC128182-1|AAI28183.1|  421|Homo sapiens IQUB protein protein.         31   5.6  
BC128181-1|AAI28182.1|  791|Homo sapiens IQ motif and ubiquitin ...    31   5.6  
BC091520-1|AAH91520.1|  791|Homo sapiens IQ motif and ubiquitin ...    31   5.6  
BC036121-1|AAH36121.1|  791|Homo sapiens IQUB protein protein.         31   5.6  
BC026173-1|AAH26173.1|  596|Homo sapiens IQUB protein protein.         31   5.6  
AK093153-1|BAC04074.1|  791|Homo sapiens protein ( Homo sapiens ...    31   5.6  

>BC128182-1|AAI28183.1|  421|Homo sapiens IQUB protein protein.
          Length = 421

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = +3

Query: 339 HQPTHLAMHNLHQGLRHVLPVSSPKLVIAEEKQTSTTVMEHNVSQLNQVTSTHITNFGTP 518
           H+ T +  HN   G + V P   P+ +    + T T   + N+ Q    TST +TN G  
Sbjct: 258 HKVTGVEYHNA--GTQTV-PKRIPERLSIFCRDTQTVFQKKNLQQTTNTTSTQMTNIGVY 314

Query: 519 KGELSKTLPGPSK 557
              ++  L  P K
Sbjct: 315 VSNMTDKLVTPGK 327


>BC128181-1|AAI28182.1|  791|Homo sapiens IQ motif and ubiquitin
           domain containing protein.
          Length = 791

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = +3

Query: 339 HQPTHLAMHNLHQGLRHVLPVSSPKLVIAEEKQTSTTVMEHNVSQLNQVTSTHITNFGTP 518
           H+ T +  HN   G + V P   P+ +    + T T   + N+ Q    TST +TN G  
Sbjct: 258 HKVTGVEYHNA--GTQTV-PKRIPERLSIFCRDTQTVFQKKNLQQTTNTTSTQMTNIGVY 314

Query: 519 KGELSKTLPGPSK 557
              ++  L  P K
Sbjct: 315 VSNMTDKLVTPGK 327


>BC091520-1|AAH91520.1|  791|Homo sapiens IQ motif and ubiquitin
           domain containing protein.
          Length = 791

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = +3

Query: 339 HQPTHLAMHNLHQGLRHVLPVSSPKLVIAEEKQTSTTVMEHNVSQLNQVTSTHITNFGTP 518
           H+ T +  HN   G + V P   P+ +    + T T   + N+ Q    TST +TN G  
Sbjct: 258 HKVTGVEYHNA--GTQTV-PKRIPERLSIFCRDTQTVFQKKNLQQTTNTTSTQMTNIGVY 314

Query: 519 KGELSKTLPGPSK 557
              ++  L  P K
Sbjct: 315 VSNMTDKLVTPGK 327


>BC036121-1|AAH36121.1|  791|Homo sapiens IQUB protein protein.
          Length = 791

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = +3

Query: 339 HQPTHLAMHNLHQGLRHVLPVSSPKLVIAEEKQTSTTVMEHNVSQLNQVTSTHITNFGTP 518
           H+ T +  HN   G + V P   P+ +    + T T   + N+ Q    TST +TN G  
Sbjct: 258 HKVTGVEYHNA--GTQTV-PKRIPERLSIFCRDTQTVFQKKNLQQTTNTTSTQMTNIGVY 314

Query: 519 KGELSKTLPGPSK 557
              ++  L  P K
Sbjct: 315 VSNMTDKLVTPGK 327


>BC026173-1|AAH26173.1|  596|Homo sapiens IQUB protein protein.
          Length = 596

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = +3

Query: 339 HQPTHLAMHNLHQGLRHVLPVSSPKLVIAEEKQTSTTVMEHNVSQLNQVTSTHITNFGTP 518
           H+ T +  HN   G + V P   P+ +    + T T   + N+ Q    TST +TN G  
Sbjct: 258 HKVTGVEYHNA--GTQTV-PKRIPERLSIFCRDTQTVFQKKNLQQTTNTTSTQMTNIGVY 314

Query: 519 KGELSKTLPGPSK 557
              ++  L  P K
Sbjct: 315 VSNMTDKLVTPGK 327


>AK093153-1|BAC04074.1|  791|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35834 fis, clone TESTI2006615. ).
          Length = 791

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = +3

Query: 339 HQPTHLAMHNLHQGLRHVLPVSSPKLVIAEEKQTSTTVMEHNVSQLNQVTSTHITNFGTP 518
           H+ T +  HN   G + V P   P+ +    + T T   + N+ Q    TST +TN G  
Sbjct: 258 HKVTGVEYHNA--GTQTV-PKRIPERLSIFCRDTQTVFQKKNLQQTTNTTSTQMTNIGVY 314

Query: 519 KGELSKTLPGPSK 557
              ++  L  P K
Sbjct: 315 VSNMTDKLVTPGK 327


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,332,448
Number of Sequences: 237096
Number of extensions: 2315676
Number of successful extensions: 8227
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8227
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)