Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C15
         (900 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X79238-1|CAA55820.1|  115|Homo sapiens ribosomal protein L30 pro...   200   4e-51
L05095-1|AAC15858.1|  115|Homo sapiens ribosomal protein L30 pro...   200   4e-51
BC095426-1|AAH95426.1|  115|Homo sapiens ribosomal protein L30 p...   200   4e-51
BC032700-1|AAH32700.1|  115|Homo sapiens ribosomal protein L30 p...   200   4e-51
AB070559-1|BAB79491.1|  115|Homo sapiens ribosomal protein L30 p...   200   4e-51
X81625-1|CAA57281.1|  437|Homo sapiens C11 protein protein.            34   0.61 
U90176-1|AAB49726.1|  437|Homo sapiens eukaryotic release factor...    34   0.61 
BT007374-1|AAP36038.1|  404|Homo sapiens eukaryotic translation ...    34   0.61 
BC088358-1|AAH88358.1|  437|Homo sapiens eukaryotic translation ...    34   0.61 
BC014269-1|AAH14269.1|  404|Homo sapiens ETF1 protein protein.         34   0.61 
AF095901-1|AAD43966.1|  437|Homo sapiens eRF1 protein.                 34   0.61 

>X79238-1|CAA55820.1|  115|Homo sapiens ribosomal protein L30
           protein.
          Length = 115

 Score =  200 bits (489), Expect = 4e-51
 Identities = 94/110 (85%), Positives = 101/110 (91%)
 Frame = +3

Query: 99  MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 278
           MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1   MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60

Query: 279 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 428
           EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 61  EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110


>L05095-1|AAC15858.1|  115|Homo sapiens ribosomal protein L30
           protein.
          Length = 115

 Score =  200 bits (489), Expect = 4e-51
 Identities = 94/110 (85%), Positives = 101/110 (91%)
 Frame = +3

Query: 99  MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 278
           MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1   MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60

Query: 279 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 428
           EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 61  EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110


>BC095426-1|AAH95426.1|  115|Homo sapiens ribosomal protein L30
           protein.
          Length = 115

 Score =  200 bits (489), Expect = 4e-51
 Identities = 94/110 (85%), Positives = 101/110 (91%)
 Frame = +3

Query: 99  MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 278
           MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1   MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60

Query: 279 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 428
           EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 61  EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110


>BC032700-1|AAH32700.1|  115|Homo sapiens ribosomal protein L30
           protein.
          Length = 115

 Score =  200 bits (489), Expect = 4e-51
 Identities = 94/110 (85%), Positives = 101/110 (91%)
 Frame = +3

Query: 99  MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 278
           MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1   MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60

Query: 279 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 428
           EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 61  EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110


>AB070559-1|BAB79491.1|  115|Homo sapiens ribosomal protein L30
           protein.
          Length = 115

 Score =  200 bits (489), Expect = 4e-51
 Identities = 94/110 (85%), Positives = 101/110 (91%)
 Frame = +3

Query: 99  MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 278
           MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1   MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60

Query: 279 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 428
           EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 61  EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110


>X81625-1|CAA57281.1|  437|Homo sapiens C11 protein protein.
          Length = 437

 Score = 34.3 bits (75), Expect = 0.61
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 168 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 266
           +GKYC G + TLK L  G  +++I+ +N   +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330


>U90176-1|AAB49726.1|  437|Homo sapiens eukaryotic release factor 1
           protein.
          Length = 437

 Score = 34.3 bits (75), Expect = 0.61
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 168 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 266
           +GKYC G + TLK L  G  +++I+ +N   +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330


>BT007374-1|AAP36038.1|  404|Homo sapiens eukaryotic translation
           termination factor 1 protein.
          Length = 404

 Score = 34.3 bits (75), Expect = 0.61
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 168 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 266
           +GKYC G + TLK L  G  +++I+ +N   +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297


>BC088358-1|AAH88358.1|  437|Homo sapiens eukaryotic translation
           termination factor 1 protein.
          Length = 437

 Score = 34.3 bits (75), Expect = 0.61
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 168 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 266
           +GKYC G + TLK L  G  +++I+ +N   +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330


>BC014269-1|AAH14269.1|  404|Homo sapiens ETF1 protein protein.
          Length = 404

 Score = 34.3 bits (75), Expect = 0.61
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 168 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 266
           +GKYC G + TLK L  G  +++I+ +N   +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297


>AF095901-1|AAD43966.1|  437|Homo sapiens eRF1 protein.
          Length = 437

 Score = 34.3 bits (75), Expect = 0.61
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 168 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 266
           +GKYC G + TLK L  G  +++I+ +N   +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,512,651
Number of Sequences: 237096
Number of extensions: 2014280
Number of successful extensions: 3193
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3193
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)