Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_C14
(908 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 37 0.023
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 37 0.023
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 35 0.092
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.12
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.12
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.12
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 34 0.16
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 34 0.16
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 33 0.28
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.37
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 32 0.49
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.65
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.65
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.65
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 3.5
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 3.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 3.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 3.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.5
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 4.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 4.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 4.6
AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like ... 27 4.6
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 25 7.2
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.0
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 36.7 bits (81), Expect = 0.023
Identities = 20/45 (44%), Positives = 20/45 (44%)
Frame = +1
Query: 472 GGGGXXXXPPPPXFFFXXKKXPPPXXXXGGGXAPPPXPXGGGXGG 606
GGGG PP P GGG APPP P GGG GG
Sbjct: 43 GGGGGCAPPPAPCG--GGCGGGGGGCGGGGGCAPPPAPCGGGCGG 85
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 584 GXGGGAXPPPXXXXGGGXFFXKKKXXGGGGXXXXPPPP 471
G GGG PPP GG GGGG PP P
Sbjct: 43 GGGGGCAPPPAPCGGGCG--GGGGGCGGGGGCAPPPAP 78
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 558 PPPXXXGGGFFXXKKKXGGGGXXXXPPPP 472
PPP GGG GGGG PP P
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 786 GGGXXPPPPXXXGXXXGGGG 727
GGG PPP G GGGG
Sbjct: 44 GGGGCAPPPAPCGGGCGGGG 63
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 786 GGGXXPPPPXXXGXXXGGGG 727
GGG PPP G GGGG
Sbjct: 45 GGGCAPPPAPCGGGCGGGGG 64
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 786 GGGXXPPPPXXXGXXXGGGG 727
GGG PPP G GGGG
Sbjct: 68 GGGGCAPPPAPCGGGCGGGG 87
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 786 GGGXXPPPPXXXGXXXGGGG 727
GGG PPP G GGGG
Sbjct: 69 GGGCAPPPAPCGGGCGGGGG 88
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 36.7 bits (81), Expect = 0.023
Identities = 20/45 (44%), Positives = 20/45 (44%)
Frame = +1
Query: 472 GGGGXXXXPPPPXFFFXXKKXPPPXXXXGGGXAPPPXPXGGGXGG 606
GGGG PP P GGG APPP P GGG GG
Sbjct: 43 GGGGGCAPPPAPCG--GGCGGGGGGCGGGGGCAPPPAPCGGGCGG 85
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 584 GXGGGAXPPPXXXXGGGXFFXKKKXXGGGGXXXXPPPP 471
G GGG PPP GG GGGG PP P
Sbjct: 43 GGGGGCAPPPAPCGGGCG--GGGGGCGGGGGCAPPPAP 78
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 558 PPPXXXGGGFFXXKKKXGGGGXXXXPPPP 472
PPP GGG GGGG PP P
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 786 GGGXXPPPPXXXGXXXGGGG 727
GGG PPP G GGGG
Sbjct: 44 GGGGCAPPPAPCGGGCGGGG 63
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 786 GGGXXPPPPXXXGXXXGGGG 727
GGG PPP G GGGG
Sbjct: 45 GGGCAPPPAPCGGGCGGGGG 64
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 786 GGGXXPPPPXXXGXXXGGGG 727
GGG PPP G GGGG
Sbjct: 68 GGGGCAPPPAPCGGGCGGGG 87
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 786 GGGXXPPPPXXXGXXXGGGG 727
GGG PPP G GGGG
Sbjct: 69 GGGCAPPPAPCGGGCGGGGG 88
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 34.7 bits (76), Expect = 0.092
Identities = 30/100 (30%), Positives = 30/100 (30%), Gaps = 7/100 (7%)
Frame = +1
Query: 556 GGGXAPPPXPX------GGGXGGKKXFXXXXXXKKXXXXGGXGXXXXXXXXXXXXXXXXX 717
GGG APPP P GGG GG GG G
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGG 108
Query: 718 XXXPPPPXX-XXXXXXGGGXXXPPXRXGGGXFFFXXGGGG 834
PPPP GGG GGG GGGG
Sbjct: 109 CAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGG 148
Score = 33.5 bits (73), Expect = 0.21
Identities = 28/100 (28%), Positives = 28/100 (28%)
Frame = +1
Query: 535 PPPXXXXGGGXAPPPXPXGGGXGGKKXFXXXXXXKKXXXXGGXGXXXXXXXXXXXXXXXX 714
PPP GGG GGG GG GG G
Sbjct: 55 PPPPPACGGGCGGGGGGCGGGGGG-------CGGGGGCGGGGGGCGGGGGGCGGGGGCGG 107
Query: 715 XXXXPPPPXXXXXXXXGGGXXXPPXRXGGGXFFFXXGGGG 834
PPPP GGG GGG GGGG
Sbjct: 108 GCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGG 147
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 481 GXXXXPPPPXFFFXXKKXPPPXXXXGGGXA--PPPXPXGGGXGG 606
G PPPP PPP GG PPP P GG GG
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 478 GGXXXXPPPPXFFFXXKKXPPPXXXXGGGXAPPPXPXG 591
GG PPPP PPP GG PPP P G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGG--PPPPPPPG 791
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 605 PPXPPPXGXGGGAXPPP 555
PP PPP G GG PPP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 496 PPPPXFFFXXKKXPPPXXXXGG-----GXAPPPXPXGG 594
PPPP PPP GG G PPP P GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Frame = +1
Query: 481 GXXXXPPPPXFFFXXKKXPPPXXXXG------GGXAPPPXPXGG 594
G PPPP PPP G GG PPP P GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 481 GXXXXPPPPXFFFXXKKXPPPXXXXGGGXA--PPPXPXGGGXGG 606
G PPPP PPP GG PPP P GG GG
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 478 GGXXXXPPPPXFFFXXKKXPPPXXXXGGGXAPPPXPXG 591
GG PPPP PPP GG PPP P G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGG--PPPPPPPG 791
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 605 PPXPPPXGXGGGAXPPP 555
PP PPP G GG PPP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 496 PPPPXFFFXXKKXPPPXXXXGG-----GXAPPPXPXGG 594
PPPP PPP GG G PPP P GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Frame = +1
Query: 481 GXXXXPPPPXFFFXXKKXPPPXXXXG------GGXAPPPXPXGG 594
G PPPP PPP G GG PPP P GG
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 481 GXXXXPPPPXFFFXXKKXPPPXXXXGGGXA--PPPXPXGGGXGG 606
G PPPP PPP GG PPP P GG GG
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 478 GGXXXXPPPPXFFFXXKKXPPPXXXXGGGXAPPPXPXG 591
GG PPPP PPP GG PPP P G
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGG--PPPPPPPG 374
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 605 PPXPPPXGXGGGAXPPP 555
PP PPP G GG PPP
Sbjct: 355 PPPPPPGGFKGGPPPPP 371
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 496 PPPPXFFFXXKKXPPPXXXXGG-----GXAPPPXPXGG 594
PPPP PPP GG G PPP P GG
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Frame = +1
Query: 481 GXXXXPPPPXFFFXXKKXPPPXXXXG------GGXAPPPXPXGG 594
G PPPP PPP G GG PPP P GG
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = -1
Query: 605 PPXPPPXGXGGGAXPPPXXXXGG---GXFFXKKKXXGGGGXXXXPPPP 471
PP PPP G G PPP G K GG PPPP
Sbjct: 538 PPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPP 585
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 13/58 (22%)
Frame = +1
Query: 472 GGGGXXXXPPPPXFF---------FXXKKXPP---PXXXXGGGXAPPPXP-XGGGXGG 606
GGGG PPPP + PP P GGG PPP P GGG GG
Sbjct: 23 GGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGGGCGG 80
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 605 PPXP-PPXGXGGGAXPPPXXXXGGGXFFXKKKXXGGGGXXXXPPPP 471
PP P G GGG PPP GGG GGG P P
Sbjct: 53 PPLSLPSLGGGGGCCPPPAPACGGGCGGGVAPAPIGGGYAQAPQAP 98
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +1
Query: 439 GGVFXKXKKKXGGGGXXXXPPPPXFFFXXKKXPPPXXXXGGGXAPPPXPXGGGXGG 606
GG GGG P P P GGG A P P GGG GG
Sbjct: 64 GGCCPPPAPACGGGCGGGVAPAP---IGGGYAQAPQAPIGGGYAAPQAPIGGGYGG 116
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 728 PPPPXXXPXXXGGGGXXPPPXARXGXFFFFXGGGG 832
PPPP P GGGG P GGGG
Sbjct: 31 PPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGG 65
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 734 PPXXXPXXXGGGGXXPPPXARXG 802
PP P GGGG PPP G
Sbjct: 53 PPLSLPSLGGGGGCCPPPAPACG 75
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -1
Query: 605 PPXPPPXGXGGGAXPPP 555
PP PP G GGGA PPP
Sbjct: 31 PPPPPACGCGGGAAPPP 47
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +1
Query: 472 GGGGXXXXPPPPXFFFXXKKXPPPXXXXGGGXAPPP 579
GGGG PPP PP GGG APPP
Sbjct: 22 GGGGGCGCAPPP----------PPACGCGGGAAPPP 47
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +1
Query: 496 PPP---PXFFFXXKKXPPPXXXXGGGXAPPPXPXGGGXGGKKXF 618
PPP P F K PPP G PP P G G G F
Sbjct: 727 PPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSF 770
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = -1
Query: 596 PPPXGXGGGAXP--PPXXXXGGGXFFXKKKXXGGGGXXXXPPPP 471
PPP G G G PP G GG G PPPP
Sbjct: 757 PPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 472 GGGGXXXXPPPPXFFFXXKKXPPPXXXXGGGXAPPPXPXGGGXGG 606
G G PPPP PP GG PP P GG
Sbjct: 763 GAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGG 807
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
Frame = -1
Query: 833 PPPPXXK-----KKXPPPXRXGGXXXPPPXXXXXXXXGGGG 726
PPPP + PPP R G PPP G GG
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGG 796
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = +1
Query: 478 GGXXXXPPPPXFFFXXKKX---PPPXXXXGGGXAPPPXPXGG 594
GG PPPP F PPP GG PP P G
Sbjct: 776 GGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGPPFRPENG 817
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +1
Query: 472 GGGGXXXXPPPPXFFFXXKKXPPPXXXXGGGXAPPP 579
GGGG PPP PPP GGG PPP
Sbjct: 25 GGGGCGCGAPPPP----PACAPPPAPACGGGAPPPP 56
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 831 PPPPXKKKXXPXRAXGGGXXPPP 763
PPPP P A GGG PPP
Sbjct: 34 PPPPPACAPPPAPACGGGAPPPP 56
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.65
Identities = 30/123 (24%), Positives = 32/123 (26%), Gaps = 2/123 (1%)
Frame = -1
Query: 833 PPPPXXKKKXPPPXRXGGXXXPPPXXXXXXXXGGGGXXXXXXXXXXXXXXXXXXXXPXPP 654
PP P + PPP G PPP G P PP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 653 XXXXFFXXXXXXKXFFPPXPPP--XGXGGGAXPPPXXXXGGGXFFXKKKXXGGGGXXXXP 480
+ PP PPP G G PPP G G P
Sbjct: 338 PPGMRYPGG------MPPPPPPRYPSAGPGMYPPPPPS-------RPPAPPSGHGMIPPP 384
Query: 479 PPP 471
PPP
Sbjct: 385 PPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.65
Identities = 30/123 (24%), Positives = 32/123 (26%), Gaps = 2/123 (1%)
Frame = -1
Query: 833 PPPPXXKKKXPPPXRXGGXXXPPPXXXXXXXXGGGGXXXXXXXXXXXXXXXXXXXXPXPP 654
PP P + PPP G PPP G P PP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 653 XXXXFFXXXXXXKXFFPPXPPP--XGXGGGAXPPPXXXXGGGXFFXKKKXXGGGGXXXXP 480
+ PP PPP G G PPP G G P
Sbjct: 348 PPGMRYPGG------MPPPPPPRYPSAGPGMYPPPPPS-------RPPAPPSGHGMIPPP 394
Query: 479 PPP 471
PPP
Sbjct: 395 PPP 397
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 496 PPPPXFFFXXKKXPPPXXXXGGGXAPPPXPXGGGXG 603
PP P PPP GG PPP P GG G
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMG 601
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +1
Query: 496 PPPPXFFFXXKKXPPPXXXXGGGXAPPPXPXGG--GXGG 606
PPPP PPP G APPP G G GG
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGG 405
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -1
Query: 590 PXGXGGGAXPPPXXXXGGGXFFXKKKXXGGGGXXXXPPPP 471
P G GG PPP G + + GG G PPPP
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFG----PPPP 438
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 481 GXXXXPPPPXFFFXXKKXPPPXXXXGGGXAPPPXPXGGGXGG 606
G PPPP + PP GGG PP P G GG
Sbjct: 785 GGPGAPPPPGM-----RPPPGAPGGGGGMYPPLIPTRPGPGG 821
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = -1
Query: 605 PPXPPPXGXGGG---AXPPPXXXXGGGXFFXKKKXXGGGG 495
PP PPP GGG PPP GG + G G
Sbjct: 39 PPPPPPPPCGGGYEAPPPPPPPSYAGGPSYAGPSYAGSYG 78
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 535 PPPXXXXGGGXAPPPXPXGGGXGG 606
PPP GG APPP P GG
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGG 65
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 481 GXXXXPPPPXFFFXXKKXPPPXXXXGGGXAPPPXPXGGGXGG 606
G PPPP + PP GGG PP P G GG
Sbjct: 785 GGPGAPPPPGM-----RPPPGAPGGGGGMYPPLIPTRPGPGG 821
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 556 GGGXAPPPXPXGGGXGG 606
GGG PP P GGG GG
Sbjct: 622 GGGGGPPRGPGGGGGGG 638
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 556 GGGXAPPPXPXGGGXGG 606
GGG PP P GGG GG
Sbjct: 622 GGGGGPPRGPGGGGGGG 638
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 831 PPPPXKKKXXPXRAXGGGXXPPPP 760
PPPP K P A G G PPPP
Sbjct: 237 PPPPPPPKGSPPLA-GSGSPPPPP 259
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 728 PPPPXXXPXXXGGGGXXPPPXA 793
PPPP P G G PPP A
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAA 261
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 728 PPPPXXXPXXXGGGGXXPPPXA 793
PPPP P GG PPP A
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRA 294
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 830 PPPXXKKKXPPPXRXGGXXXPPP 762
PPP PPP R G PPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 831 PPPPXKKKXXPXRAXGGGXXPPPP 760
PPPP K P A G G PPPP
Sbjct: 258 PPPPPPPKGSPPLA-GSGSPPPPP 280
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 728 PPPPXXXPXXXGGGGXXPPPXA 793
PPPP P G G PPP A
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAA 282
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 728 PPPPXXXPXXXGGGGXXPPPXA 793
PPPP P GG PPP A
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRA 315
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 830 PPPXXKKKXPPPXRXGGXXXPPP 762
PPP PPP R G PPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 831 PPPPXKKKXXPXRAXGGGXXPPPP 760
PPPP K P A G G PPPP
Sbjct: 243 PPPPPPPKGSPPLA-GSGSPPPPP 265
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 728 PPPPXXXPXXXGGGGXXPPPXA 793
PPPP P G G PPP A
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAA 267
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 728 PPPPXXXPXXXGGGGXXPPPXA 793
PPPP P GG PPP A
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRA 300
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 830 PPPXXKKKXPPPXRXGGXXXPPP 762
PPP PPP R G PPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPP 308
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 605 PPXPPPXGXGGGAXPP 558
PP PPP G GG + PP
Sbjct: 32 PPPPPPCGCGGPSLPP 47
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 831 PPPPXKKKXXPXRAXGGGXXPPPPXXXGXXXGG 733
PPPP A G G PPPP GG
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 831 PPPPXKKKXXPXRAXGGGXXPPPPXXXGXXXGG 733
PPPP A G G PPPP GG
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 10/55 (18%)
Frame = +1
Query: 472 GGGGXXXXPPP--------PXFFFXXKKXPPPXXXXGGGXAPPPXPXGG--GXGG 606
GG G PPP P F PPP GG PP GG G GG
Sbjct: 125 GGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGG 179
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 10/55 (18%)
Frame = +1
Query: 472 GGGGXXXXPPP--------PXFFFXXKKXPPPXXXXGGGXAPPPXPXGG--GXGG 606
GG G PPP P F PPP GG PP GG G GG
Sbjct: 405 GGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGG 459
>AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like
(grd related) protein31 protein.
Length = 156
Score = 26.6 bits (56), Expect(2) = 4.6
Identities = 12/18 (66%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = +1
Query: 556 GGGXAPPPXP-XGGGXGG 606
G G APPP P GGG GG
Sbjct: 43 GCGCAPPPPPCCGGGCGG 60
Score = 21.0 bits (42), Expect(2) = 4.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 475 GGGXXXXPPPP 507
GGG PPPP
Sbjct: 41 GGGCGCAPPPP 51
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 25.4 bits (53), Expect(2) = 7.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 556 GGGXAPPPXPXGGGXGGKKXF 618
G G PPP P GG G ++ +
Sbjct: 207 GSGRFPPPPPPYGGGGRRRPY 227
Score = 21.4 bits (43), Expect(2) = 7.2
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +1
Query: 439 GGVFXKXKKKXGGGGXXXXPPPP 507
GG+ GGG PPPP
Sbjct: 193 GGMGGGGGSGGSGGGSGRFPPPP 215
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 496 PPPPXFFFXXKKXPPPXXXXGGGXAPPPXP 585
PPPP FF PP APPP P
Sbjct: 725 PPPPPQFFPMIGGPPLMHPTFSTSAPPPPP 754
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 830 PPPXXKKKXPPPXRXGGXXXPPP 762
PPP PPP GG PPP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPP 88
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 496 PPPPXFFFXXKKXPPPXXXXGGGXAPPPXPXGG 594
PPPP PPP GG PPP GG
Sbjct: 75 PPPPG----PGGIPPPPPMFAGGIPPPPPMMGG 103
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 833 PPPPXXKKKXPPPXRXGGXXXPPP 762
PPPP PPP G PPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPP 98
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 833 PPPPXXKKKXPPPXRXGGXXXPPP 762
PPPP PPP G PPP
Sbjct: 96 PPPPMMGGIPPPPPMFGAPPPPPP 119
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +1
Query: 499 PPPXFFFXXKKXPPPXXXXGGGXAPPPXPXGGGXG 603
PPP PPP G APPP P G G G
Sbjct: 40 PPPPVGAGVGYAPPPPRPYGATYAPPP-PMGIGAG 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,395,099
Number of Sequences: 27780
Number of extensions: 371441
Number of successful extensions: 2837
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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