Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C12
         (809 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000051A39F Cluster: PREDICTED: similar to Fumarylace...    43   0.011
UniRef50_O65374 Cluster: F12F1.8 protein; n=7; Eukaryota|Rep: F1...    34   3.7  
UniRef50_Q3DXY2 Cluster: Fumarylacetoacetase; n=1; Chloroflexus ...    33   8.5  
UniRef50_P35505 Cluster: Fumarylacetoacetase; n=108; cellular or...    33   8.5  

>UniRef50_UPI000051A39F Cluster: PREDICTED: similar to
           Fumarylacetoacetase (Fumarylacetoacetate hydrolase)
           (Beta-diketonase) (FAA); n=1; Apis mellifera|Rep:
           PREDICTED: similar to Fumarylacetoacetase
           (Fumarylacetoacetate hydrolase) (Beta-diketonase) (FAA)
           - Apis mellifera
          Length = 373

 Score = 42.7 bits (96), Expect = 0.011
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = +3

Query: 90  MKSFIEYSSDSDFPIENXPDGVLRLIKMPK 179
           MKSF+EYSSD DFPIEN P GV      P+
Sbjct: 1   MKSFVEYSSDCDFPIENLPYGVFSTKNNPQ 30


>UniRef50_O65374 Cluster: F12F1.8 protein; n=7; Eukaryota|Rep:
           F12F1.8 protein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 408

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +3

Query: 90  MKSFIEYSSDSDFPIENXPDGVLR 161
           +KSFI+  SDS FPI+N P GV +
Sbjct: 4   LKSFIDVGSDSHFPIQNLPYGVFK 27


>UniRef50_Q3DXY2 Cluster: Fumarylacetoacetase; n=1; Chloroflexus
           aurantiacus J-10-fl|Rep: Fumarylacetoacetase -
           Chloroflexus aurantiacus J-10-fl
          Length = 442

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 90  MKSFIEYSSDSDFPIENXPDGVLR 161
           + SF+  + DSDFP+EN P GV R
Sbjct: 29  LTSFVPVAPDSDFPLENLPYGVFR 52


>UniRef50_P35505 Cluster: Fumarylacetoacetase; n=108; cellular
           organisms|Rep: Fumarylacetoacetase - Mus musculus
           (Mouse)
          Length = 419

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +3

Query: 96  SFIEYSSDSDFPIENXPDGVLRLIKMPK 179
           SFI  + DSDFPI+N P GV      PK
Sbjct: 2   SFIPVAEDSDFPIQNLPYGVFSTQSNPK 29


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,777,913
Number of Sequences: 1657284
Number of extensions: 6435111
Number of successful extensions: 8964
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8931
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)