Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C10
         (904 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...    79   4e-15
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...    79   4e-15
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...    79   5e-15
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...    75   1e-13

>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 41/86 (47%), Positives = 47/86 (54%)
 Frame = +3

Query: 285 YXDXXSRPXXPGLVKYXXSGPVVPMVWEGLNVVKTGPXN*KXXXXPXDSHPGTXRGXLXX 464
           Y D  S+P   GLV+Y  SGPVV MVWEG  VV TG         P  + PGT RG    
Sbjct: 51  YADLSSKPFFGGLVEYIVSGPVVAMVWEGKQVVSTG-RKLVGATNPLAAEPGTIRGDFAV 109

Query: 465 XXGRXIIHXSDSVESXNXXIXLWFTD 542
             GR +IH SDSVE+    I LWF +
Sbjct: 110 DIGRNVIHGSDSVENARKEIALWFPE 135



 Score = 32.7 bits (71), Expect = 0.41
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 155 IXVXPDXVQRGXXGTXXERXENKGFXXXGMKXV 253
           I + PD VQRG  G    R E KGF    MK +
Sbjct: 8   IMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLI 40


>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 44/102 (43%), Positives = 49/102 (48%)
 Frame = +3

Query: 258 PSXEXLQXXYXDXXSRPXXPGLVKYXXSGPVVPMVWEGLNVVKTGPXN*KXXXXPXDSHP 437
           PS E  Q  Y D   RP   GL  +  SGPV+ MVWEG  V+K G         P  S P
Sbjct: 84  PSKEFAQKHYHDLKDRPFFNGLCDFLSSGPVLAMVWEGEGVIKYG-RKLIGATDPQKSEP 142

Query: 438 GTXRGXLXXXXGRXIIHXSDSVESXNXXIXLWFTDTXXVGWT 563
           GT RG L    GR IIH SD  E+    I LWF     V +T
Sbjct: 143 GTIRGDLAVVVGRNIIHGSDGPETAKAEIGLWFEPRELVSYT 184



 Score = 31.5 bits (68), Expect = 0.95
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = +2

Query: 110 VQSSFMXAXXRXRPXIXVXPDXVQRGXXGTXXERXENKGFXXXGMKXV 253
           +Q     A    R  I + PD VQRG       R E KGF    +K V
Sbjct: 35  LQDQEAHAAEMERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLV 82


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score = 79.0 bits (186), Expect = 5e-15
 Identities = 40/89 (44%), Positives = 49/89 (55%)
 Frame = +3

Query: 276 QXXYXDXXSRPXXPGLVKYXXSGPVVPMVWEGLNVVKTGPXN*KXXXXPXDSHPGTXRGX 455
           Q  Y D   +P  PGLV+Y  SGPVV MVWEG +VV TG         P ++ PGT R  
Sbjct: 46  QQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATG-RRIIGATRPWEAAPGTIRAD 104

Query: 456 LXXXXGRXIIHXSDSVESXNXXIXLWFTD 542
                GR +IH SDSV++    I LWF +
Sbjct: 105 YAVEVGRNVIHGSDSVDNGKKEIALWFPE 133



 Score = 35.1 bits (77), Expect = 0.077
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +2

Query: 155 IXVXPDXVQRGXXGTXXERXENKGFXXXGMK 247
           I + PD VQRG  G    R E KGF   GMK
Sbjct: 6   IMIKPDGVQRGLIGDIISRFEKKGFYLRGMK 36


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 37/95 (38%), Positives = 47/95 (49%)
 Frame = +3

Query: 276 QXXYXDXXSRPXXPGLVKYXXSGPVVPMVWEGLNVVKTGPXN*KXXXXPXDSHPGTXRGX 455
           Q  Y D   +P  PGL++Y  SGPVV M WEG  VV +          P  + PGT RG 
Sbjct: 47  QEHYKDLKEKPFFPGLIEYITSGPVVCMAWEGNGVVASA-RKLIGATNPLQAEPGTIRGD 105

Query: 456 LXXXXGRXIIHXSDSVESXNXXIXLWFTDTXXVGW 560
           L    GR ++H SDS ++    I LWF +     W
Sbjct: 106 LAVQTGRNVVHGSDSPDNGKREIALWFKEGELCEW 140



 Score = 33.9 bits (74), Expect = 0.18
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +2

Query: 155 IXVXPDXVQRGXXGTXXERXENKGFXXXGMK 247
           I + PD VQRG  G    R E KGF   G+K
Sbjct: 7   IMIKPDGVQRGLVGEIISRFEKKGFVLKGLK 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,371,968
Number of Sequences: 37544
Number of extensions: 61603
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)