Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C10
         (904 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13107-1|CAA31500.1|  153|Drosophila melanogaster protein ( Dros...   113   4e-25
AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p pro...   113   4e-25
AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA...   113   4e-25
BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p pro...    60   3e-09

>X13107-1|CAA31500.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterawd mRNA ( abnormal wing disc ).
           ).
          Length = 153

 Score =  113 bits (271), Expect = 4e-25
 Identities = 58/109 (53%), Positives = 63/109 (57%)
 Frame = +3

Query: 261 SXEXLQXXYXDXXSRPXXPGLVKYXXSGPVVPMVWEGLNVVKTGPXN*KXXXXPXDSHPG 440
           S E L+  Y D  +RP  PGLV Y  SGPVVPMVWEGLNVVKTG         P DS PG
Sbjct: 45  SKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVKTG-RQMLGATNPADSLPG 103

Query: 441 TXRGXLXXXXGRXIIHXSDSVESXNXXIXLWFTDTXXVGWTPAXXNXXY 587
           T RG      GR IIH SD+VES    I LWF +   V WTPA  +  Y
Sbjct: 104 TIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIY 152



 Score = 36.7 bits (81), Expect = 0.043
 Identities = 19/43 (44%), Positives = 21/43 (48%)
 Frame = +2

Query: 131 AXXRXRPXIXVXPDXVQRGXXGTXXERXENKGFXXXGMKXVCA 259
           A  + R  I V PD VQRG  G   ER E KGF    +K   A
Sbjct: 2   AANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWA 44


>AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p
           protein.
          Length = 153

 Score =  113 bits (271), Expect = 4e-25
 Identities = 58/109 (53%), Positives = 63/109 (57%)
 Frame = +3

Query: 261 SXEXLQXXYXDXXSRPXXPGLVKYXXSGPVVPMVWEGLNVVKTGPXN*KXXXXPXDSHPG 440
           S E L+  Y D  +RP  PGLV Y  SGPVVPMVWEGLNVVKTG         P DS PG
Sbjct: 45  SKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVKTG-RQMLGATNPADSLPG 103

Query: 441 TXRGXLXXXXGRXIIHXSDSVESXNXXIXLWFTDTXXVGWTPAXXNXXY 587
           T RG      GR IIH SD+VES    I LWF +   V WTPA  +  Y
Sbjct: 104 TIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIY 152



 Score = 36.7 bits (81), Expect = 0.043
 Identities = 19/43 (44%), Positives = 21/43 (48%)
 Frame = +2

Query: 131 AXXRXRPXIXVXPDXVQRGXXGTXXERXENKGFXXXGMKXVCA 259
           A  + R  I V PD VQRG  G   ER E KGF    +K   A
Sbjct: 2   AANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWA 44


>AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA
           protein.
          Length = 172

 Score =  113 bits (271), Expect = 4e-25
 Identities = 58/109 (53%), Positives = 63/109 (57%)
 Frame = +3

Query: 261 SXEXLQXXYXDXXSRPXXPGLVKYXXSGPVVPMVWEGLNVVKTGPXN*KXXXXPXDSHPG 440
           S E L+  Y D  +RP  PGLV Y  SGPVVPMVWEGLNVVKTG         P DS PG
Sbjct: 64  SKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVKTG-RQMLGATNPADSLPG 122

Query: 441 TXRGXLXXXXGRXIIHXSDSVESXNXXIXLWFTDTXXVGWTPAXXNXXY 587
           T RG      GR IIH SD+VES    I LWF +   V WTPA  +  Y
Sbjct: 123 TIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIY 171



 Score = 36.7 bits (81), Expect = 0.043
 Identities = 19/43 (44%), Positives = 21/43 (48%)
 Frame = +2

Query: 131 AXXRXRPXIXVXPDXVQRGXXGTXXERXENKGFXXXGMKXVCA 259
           A  + R  I V PD VQRG  G   ER E KGF    +K   A
Sbjct: 21  AANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWA 63


>BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p
           protein.
          Length = 118

 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 27/42 (64%), Positives = 30/42 (71%)
 Frame = +3

Query: 261 SXEXLQXXYXDXXSRPXXPGLVKYXXSGPVVPMVWEGLNVVK 386
           S E L+  Y D  +RP  PGLV Y  SGPVVPMVWEGLNVV+
Sbjct: 44  SKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVQ 85



 Score = 36.7 bits (81), Expect = 0.043
 Identities = 19/43 (44%), Positives = 21/43 (48%)
 Frame = +2

Query: 131 AXXRXRPXIXVXPDXVQRGXXGTXXERXENKGFXXXGMKXVCA 259
           A  + R  I V PD VQRG  G   ER E KGF    +K   A
Sbjct: 1   AANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWA 43


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,030,985
Number of Sequences: 53049
Number of extensions: 103705
Number of successful extensions: 118
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)