Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_C09
(907 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 138 2e-31
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 108 2e-22
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 77 5e-13
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 77 5e-13
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 76 1e-12
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 67 7e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 52 2e-05
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 49 1e-04
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 42 0.016
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 40 0.066
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.087
UniRef50_Q8IQJ5 Cluster: CG32121-PA; n=2; Sophophora|Rep: CG3212... 34 4.3
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.7
UniRef50_A4WT25 Cluster: Flagellar hook-length control protein; ... 34 5.7
UniRef50_Q4QAI7 Cluster: Putative uncharacterized protein; n=2; ... 33 7.6
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 138 bits (334), Expect = 2e-31
Identities = 61/75 (81%), Positives = 63/75 (84%)
Frame = +2
Query: 632 PGSSPRALSCFRXCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSSAPSWAVCTNPPFNP 811
P +P FR CRLPDTCPPFSLREAWRFLIAHAVGISVRCRS APSWAVCTNPPF+P
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
Query: 812 TXAPYPVTIVLXPXR 856
T APYPVTIVL P R
Sbjct: 109 TAAPYPVTIVLSPTR 123
Score = 89.0 bits (211), Expect = 1e-16
Identities = 50/79 (63%), Positives = 55/79 (69%)
Frame = +3
Query: 489 SKRPGTVKRXRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPLVRSPVSX 668
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP + +
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSC-ALLFR 60
Query: 669 PAAYRIPVRLSPFGKRGAF 725
P R+P PF R A+
Sbjct: 61 PC--RLPDTCPPFSLREAW 77
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 108 bits (260), Expect = 2e-22
Identities = 65/124 (52%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Frame = +3
Query: 321 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 500
R +C G +PLPRSLTR ARSFGCGERY+LT + R K RP
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTDG------DGNFLEDTRKTLSKEEIRP 79
Query: 501 GTVKRXRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP---LVRSPVSXP 671
R RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL AP L+ P P
Sbjct: 80 ------RRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Query: 672 AAYR 683
++R
Sbjct: 134 VSFR 137
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 77.4 bits (182), Expect = 5e-13
Identities = 42/92 (45%), Positives = 48/92 (52%)
Frame = -1
Query: 856 PGWXQDDSYXXXXXXXXXXXXRAHSPAWSGRPTPN*DTYSVSYEKAPRFPKGERRTGIR* 677
PGW QDDSY RA+SPAWS RP P+ DT SVSYEKAPRFPKG++ +
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSG 67
Query: 676 AAGSETGERTRGASRGKRLVSL*SCRVSPPLT 581
GA+ K SL PPLT
Sbjct: 68 KRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 77.4 bits (182), Expect = 5e-13
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 507 VKRXRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 644
V+ R RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL AP
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAP 89
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 76.2 bits (179), Expect = 1e-12
Identities = 39/73 (53%), Positives = 43/73 (58%)
Frame = +2
Query: 638 SSPRALSCFRXCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSSAPSWAVCTNPPFNPTX 817
S P ALSC PPFSL + + GIS RCRS APSWAV NPPF+PT
Sbjct: 41 SLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTA 100
Query: 818 APYPVTIVLXPXR 856
APYPVT+ L P R
Sbjct: 101 APYPVTVHLSPTR 113
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 66.9 bits (156), Expect = 7e-10
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 664 PXLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 759
P LPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 6 PTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 497 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 384
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 297 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 464
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +1
Query: 787 VHEPPVQPDRCALSGNYRLXSXPVXXXYXP 876
+HEPPVQPDRCALSGNYRL S PV P
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSP 30
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 396 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRXRCWRFSIGSAPLTSITK 569
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 570 IDAQVRGGETRQDYKDTRRFPLEAP 644
I Q + +T+ +YK T FPL++P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSP 106
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/36 (61%), Positives = 22/36 (61%)
Frame = -1
Query: 859 LPGWXQDDSYXXXXXXXXXXXXRAHSPAWSGRPTPN 752
LPGW QDDSY RAHSPAWS RPTPN
Sbjct: 7 LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 416 HSKAVIRLSTESGDNAGKNM 475
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +1
Query: 223 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 345
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.3 bits (95), Expect = 0.016
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 99 DPXMIRYIDEFGQTTTRMQ 155
DP MIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 40.3 bits (90), Expect = 0.066
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = -1
Query: 856 PGWXQDDSYXXXXXXXXXXXXRAHSPAWSGRPTPN*DT 743
PGW Q +SY A+SPAWS RPTP+ DT
Sbjct: 8 PGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.087
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 367 ERGSGRAPNTQTASPRALADSLMQ 296
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q8IQJ5 Cluster: CG32121-PA; n=2; Sophophora|Rep:
CG32121-PA - Drosophila melanogaster (Fruit fly)
Length = 626
Score = 34.3 bits (75), Expect = 4.3
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = +2
Query: 659 CFRXCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSSAPSWAVCTNPPFNPTXAPYPVTI 838
CF RL PP LR + L+ + S SS+ S C+NP NP A PVT+
Sbjct: 260 CFGSKRLKGDSPPKELRRLEKSLLKNPKSSSTTNSSSSKSPQECSNP--NPIVATSPVTL 317
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 506 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 384
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A4WT25 Cluster: Flagellar hook-length control protein;
n=1; Rhodobacter sphaeroides ATCC 17025|Rep: Flagellar
hook-length control protein - Rhodobacter sphaeroides
ATCC 17025
Length = 589
Score = 33.9 bits (74), Expect = 5.7
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +3
Query: 576 AQVRGGETRQDYKDTRRFPLEAPLVRSPVSXPAAYRIPVRLSPFGKRG 719
A V G+ DT P E VR P PAA R PVR +P + G
Sbjct: 296 ASVAAGKPEDVLPDTPAMPDETAPVREPGERPAAQREPVRPAPAARSG 343
>UniRef50_Q4QAI7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 538
Score = 33.5 bits (73), Expect = 7.6
Identities = 25/69 (36%), Positives = 30/69 (43%)
Frame = +2
Query: 485 GQQKARNRKKXALLAFFHRLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSPRALSCF 664
G +R A A H + D + RRS RNPT R F PGS PRAL+
Sbjct: 117 GNDVSRTTAAAAAEATTHGGQTGDAQTRGRRSPLISRNPTLCPRSVLFVPGSKPRALA-- 174
Query: 665 RXCRLPDTC 691
+ LP C
Sbjct: 175 KIPTLPADC 183
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,858,802
Number of Sequences: 1657284
Number of extensions: 16837012
Number of successful extensions: 43914
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 41892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43890
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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