Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_C08
(841 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.016
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.016
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.016
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.25
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.25
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.77
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.77
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.77
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 5.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGGGXXPPP 680
G PPPPP P GG P PPP GG PPP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGGGXXPPP 680
G PPPPP PP G P PPP GG PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGG--GXXPPP 680
G PPPPP PP G P PPP GG G PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPG---GCPPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 544 PPPPPXXXXPPGGXXKKKXPXXXXFFFXXXKXXXXPPXGGGXXPPP 681
PPPPP PP P PP GG PPP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/88 (27%), Positives = 24/88 (27%)
Frame = -2
Query: 777 PPPXXXKKKKXXXXXXPPPPXXXXXXXXFFXXGGGXXPPPPGGXXXXFXXXKKKXXXXGG 598
PPP PPPP GG PPPPGG GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPIT-----GGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 597 FFFXXPPXGXXXXGGGGGXXXPXXKKFF 514
PP G GG P F
Sbjct: 768 --CPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = +2
Query: 545 PPPPPXFXXPXGGXXKKXPPXXXFFFFXXKXXXXXPPGG-----GGXXPPP 682
PPPPP P G PP PPGG GG PPP
Sbjct: 713 PPPPPGL-PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGGGXXPPP 680
G PPPPP P GG P PPP GG PPP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGGGXXPPP 680
G PPPPP PP G P PPP GG PPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGG--GXXPPP 680
G PPPPP PP G P PPP GG G PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPG---GCPPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 544 PPPPPXXXXPPGGXXKKKXPXXXXFFFXXXKXXXXPPXGGGXXPPP 681
PPPPP PP P PP GG PPP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/88 (27%), Positives = 24/88 (27%)
Frame = -2
Query: 777 PPPXXXKKKKXXXXXXPPPPXXXXXXXXFFXXGGGXXPPPPGGXXXXFXXXKKKXXXXGG 598
PPP PPPP GG PPPPGG GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPIT-----GGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 597 FFFXXPPXGXXXXGGGGGXXXPXXKKFF 514
PP G GG P F
Sbjct: 768 --CPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = +2
Query: 545 PPPPPXFXXPXGGXXKKXPPXXXFFFFXXKXXXXXPPGG-----GGXXPPP 682
PPPPP P G PP PPGG GG PPP
Sbjct: 713 PPPPPGL-PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGGGXXPPP 680
G PPPPP P GG P PPP GG PPP
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGGGXXPPP 680
G PPPPP PP G P PPP GG PPP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGG--GXXPPP 680
G PPPPP PP G P PPP GG G PPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPG---GCPPPPPPPPPGGFKGGPPPP 370
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 544 PPPPPXXXXPPGGXXKKKXPXXXXFFFXXXKXXXXPPXGGGXXPPP 681
PPPPP PP P PP GG PPP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/88 (27%), Positives = 24/88 (27%)
Frame = -2
Query: 777 PPPXXXKKKKXXXXXXPPPPXXXXXXXXFFXXGGGXXPPPPGGXXXXFXXXKKKXXXXGG 598
PPP PPPP GG PPPPGG GG
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPIT-----GGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 597 FFFXXPPXGXXXXGGGGGXXXPXXKKFF 514
PP G GG P F
Sbjct: 351 --CPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Frame = +2
Query: 545 PPPPPXFXXPXGGXXKKXPPXXXFFFFXXKXXXXXPPGG-----GGXXPPP 682
PPPPP P G PP PPGG GG PPP
Sbjct: 296 PPPPPGL-PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3
Query: 543 PPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGGGXXPPP 680
PPP P F PP G P F PPP GG PPP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMF---AGGIPPPPPMMGGIPPPP 108
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 426 PPPFXXKXFXPPRGGXXXXPGXFFFXXXKKKIFXXXGXXPPPPPXXFXPP 575
PPP PP G P F G PPPPP PP
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPP 115
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPP--PXGG-GXXPPP 680
G PPPPP F PP G P + PP P G G PPP
Sbjct: 315 GMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 366
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +2
Query: 545 PPPPPXFXXPXGGXXKKXPPXXXFFFFXXKXXXXXPPGGGGXXPPP 682
PPPP P G PP F PPG GG PPP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRF---------GPPGMGGMPPPP 337
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPP--PXGG-GXXPPP 680
G PPPPP F PP G P + PP P G G PPP
Sbjct: 325 GMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 376
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +2
Query: 545 PPPPPXFXXPXGGXXKKXPPXXXFFFFXXKXXXXXPPGGGGXXPPP 682
PPPP P G PP F PPG GG PPP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRF---------GPPGMGGMPPPP 347
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 533 GXXXPPPPPXFXXPXGGXXKKXPPXXXFFFFXXKXXXXXPPGGGGXXPPP 682
G PPPPP P G PP + PP G PPP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGGGXXPPPXXXKK 695
G PPPPP PP G PPP G G PPP K+
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGS-----------PPPAGTGSPPPPPRQKR 337
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +1
Query: 514 KKFFXPGXXXPPPPPXXXXPPGGXXKKKXPXXXXFFFXXXKXXXXPPXGGGXXPPP 681
K+ P PPPPP PP P + PP G PPP
Sbjct: 228 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 9/58 (15%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPX---------GGGXXPPP 680
G PPPPP PP G P + PPP GG PPP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 533 GXXXPPPPPXFXXPXGGXXKKXPPXXXFFFFXXKXXXXXPPGGGGXXPPP 682
G PPPPP P G PP + PP G PPP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGGGXXPPPXXXKK 695
G PPPPP PP G PPP G G PPP K+
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGS-----------PPPAGTGSPPPPPRQKR 358
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +1
Query: 514 KKFFXPGXXXPPPPPXXXXPPGGXXKKKXPXXXXFFFXXXKXXXXPPXGGGXXPPP 681
K+ P PPPPP PP P + PP G PPP
Sbjct: 249 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 9/58 (15%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPX---------GGGXXPPP 680
G PPPPP PP G P + PPP GG PPP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 533 GXXXPPPPPXFXXPXGGXXKKXPPXXXFFFFXXKXXXXXPPGGGGXXPPP 682
G PPPPP P G PP + PP G PPP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPXGGGXXPPPXXXKK 695
G PPPPP PP G PPP G G PPP K+
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGS-----------PPPAGTGSPPPPPRQKR 343
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +1
Query: 514 KKFFXPGXXXPPPPPXXXXPPGGXXKKKXPXXXXFFFXXXKXXXXPPXGGGXXPPP 681
K+ P PPPPP PP P + PP G PPP
Sbjct: 234 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 9/58 (15%)
Frame = +3
Query: 534 GXXPPPPPXXFXPPXGGXKKKXPXXXXFFFXXXKXXXPPPX---------GGGXXPPP 680
G PPPPP PP G P + PPP GG PPP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 529 PGXXXPPPPPXXXXPPGGXXKKKXPXXXXFFFXXXKXXXXPPXGGGXXPPP 681
PG PP P PPGG P F PP G PP
Sbjct: 181 PGAYPPPRMPIGHGPPGGPPMPGPPQRSRFDQPDGGDRWGPPMRGVPRTPP 231
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 529 PGXXXPPPPPXXXXPPGGXXKKKXPXXXXFFFXXXKXXXXPPXGGGXXPPP 681
PG PP P PPGG P F PP G PP
Sbjct: 181 PGAYPPPRMPIGHGPPGGPPMPGPPQRSRFDQPDGGDRWGPPMRGVPRTPP 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,216,841
Number of Sequences: 27780
Number of extensions: 491992
Number of successful extensions: 1459
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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