Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_C07
(914 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-... 72 2e-11
UniRef50_UPI000155F28D Cluster: PREDICTED: hypothetical protein;... 69 2e-10
UniRef50_Q4SGM6 Cluster: Chromosome 3 SCAF14593, whole genome sh... 64 5e-09
UniRef50_O08695 Cluster: D9 splice variant 3; n=3; Mus musculus|... 62 3e-08
UniRef50_Q8BPD7 Cluster: 18 days pregnant adult female placenta ... 48 2e-05
UniRef50_Q019W8 Cluster: Homology to unknown gene; n=1; Ostreoco... 49 2e-04
UniRef50_A7PCM9 Cluster: Chromosome chr17 scaffold_12, whole gen... 47 8e-04
UniRef50_UPI0000F2C002 Cluster: PREDICTED: similar to stimulated... 46 0.001
UniRef50_A2FX12 Cluster: Putative uncharacterized protein; n=2; ... 45 0.002
UniRef50_Q96DD4 Cluster: Stimulated by retinoic acid 13 homolog;... 43 0.010
UniRef50_Q20071 Cluster: Putative uncharacterized protein; n=2; ... 42 0.029
UniRef50_Q25AJ9 Cluster: H0510A06.6 protein; n=4; Magnoliophyta|... 41 0.038
UniRef50_A2QA97 Cluster: Contig An01c0330, complete genome; n=5;... 41 0.038
UniRef50_Q9ZV97 Cluster: F9K20.17; n=1; Arabidopsis thaliana|Rep... 40 0.12
UniRef50_Q8MTP2 Cluster: Bm101; n=1; Bombyx mori|Rep: Bm101 - Bo... 40 0.12
UniRef50_Q7SC05 Cluster: Predicted protein; n=2; Neurospora cras... 37 0.62
UniRef50_A6RNU3 Cluster: Putative uncharacterized protein; n=1; ... 35 3.3
>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
protein; n=25; Arthropoda|Rep: Endonuclease and reverse
transcriptase-like protein - Bombyx mori (Silk moth)
Length = 986
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/42 (80%), Positives = 34/42 (80%)
Frame = +1
Query: 436 EELFEMITLSRFYHRIARHRSRVHPYYLEPLCPSTVRVQIFF 561
EELFEMI SRFYHR ARHRSRVHPYYLEPL STVR Q F
Sbjct: 893 EELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSF 934
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +3
Query: 600 VFSENYDMSFFK*GLCRVLNSRQQLGSASGIADVHERR 713
VF E YDMSFFK GL RVL+ RQ+LGSA GIA+VH RR
Sbjct: 949 VFPERYDMSFFKRGLWRVLSGRQRLGSAPGIAEVHGRR 986
Score = 37.1 bits (82), Expect = 0.62
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 551 RSFLPHIIQLWNELPSSLFRE 613
RSFLP I+LWNELPS++F E
Sbjct: 932 RSFLPRTIRLWNELPSTVFPE 952
>UniRef50_UPI000155F28D Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 182
Score = 68.9 bits (161), Expect = 2e-10
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = +3
Query: 159 DVIKXLLXNHFQXSKTKXAPHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDVEHIEK 338
+++ LL HF+ KTK + AL L+A++ K V E +R+++QAQ E +VDV+ +EK
Sbjct: 114 ELVSKLLHLHFKDDKTKVSGDALQLMAELLKIFVVEAAIRSIRQAQAEDLARVDVDQLEK 173
Query: 339 CLPQLMLDF 365
LPQL+LDF
Sbjct: 174 VLPQLLLDF 182
>UniRef50_Q4SGM6 Cluster: Chromosome 3 SCAF14593, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 3 SCAF14593, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 124
Score = 64.1 bits (149), Expect = 5e-09
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +3
Query: 153 KKDVIKXLLXNHFQXSKTKXAPHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDVEHI 332
+++ + LL F+ KT+ A +L+A++ + V E +R+ KQA+ E ++VD+EH
Sbjct: 54 EQETVSKLLARFFKEDKTRLGGDAAVLMAEMLRIFVREAAVRSQKQAESEDCDQVDIEHF 113
Query: 333 EKCLPQLMLDF 365
EK LPQL+LDF
Sbjct: 114 EKILPQLLLDF 124
>UniRef50_O08695 Cluster: D9 splice variant 3; n=3; Mus
musculus|Rep: D9 splice variant 3 - Mus musculus (Mouse)
Length = 169
Score = 61.7 bits (143), Expect = 3e-08
Identities = 30/69 (43%), Positives = 44/69 (63%)
Frame = +3
Query: 159 DVIKXLLXNHFQXSKTKXAPHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDVEHIEK 338
+++ LL HF+ KTK + AL L+A+ + V E +R V QAQ E + V+V+ +EK
Sbjct: 101 ELVSRLLHLHFRDCKTKVSGDALQLMAEFLRIFVLEAAVRGVWQAQAEDLDVVEVDQLEK 160
Query: 339 CLPQLMLDF 365
LPQL+LDF
Sbjct: 161 VLPQLLLDF 169
>UniRef50_Q8BPD7 Cluster: 18 days pregnant adult female placenta and
extra embryonic tissue cDNA, RIKEN full-length enriched
library, clone:3830405H07 product:stimulated by retinoic
acid 13, full insert sequence; n=2; Mus musculus|Rep: 18
days pregnant adult female placenta and extra embryonic
tissue cDNA, RIKEN full-length enriched library,
clone:3830405H07 product:stimulated by retinoic acid 13,
full insert sequence - Mus musculus (Mouse)
Length = 107
Score = 48.0 bits (109), Expect(2) = 2e-05
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +3
Query: 222 ALMLLADVAKCLVTETCLRAVKQAQREGSNKVDVEHIEKCLPQLMLDF 365
AL L+A+ + V E +R V QAQ E + V+V+ +EK LPQL+LDF
Sbjct: 60 ALQLMAEFLRIFVLEAAVRGVWQAQAEDLDVVEVDQLEKVLPQLLLDF 107
Score = 24.2 bits (50), Expect(2) = 2e-05
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 144 STIKKDVIKXLLXNHFQXSKTKXAPH 221
S +K+++ LL HF+ KTK H
Sbjct: 5 SGFRKELVSRLLHLHFRDCKTKGLGH 30
>UniRef50_Q019W8 Cluster: Homology to unknown gene; n=1;
Ostreococcus tauri|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 90
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +3
Query: 216 PHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDVEHIEKCLPQLMLDF 365
P AL LA + + + E RA A EGS ++ EHIE+ LPQLMLDF
Sbjct: 39 PEALEDLATLVEAFIVEATARACALADIEGSRSIEGEHIERVLPQLMLDF 88
>UniRef50_A7PCM9 Cluster: Chromosome chr17 scaffold_12, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_12, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 137
Score = 46.8 bits (106), Expect = 8e-04
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +3
Query: 204 TKXAPHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDVEHIEKCLPQLMLDF 365
T +AL L ++ + V E RA A+ EG NK++ H+E+ LPQL+LDF
Sbjct: 84 TSANANALKLSCELLRVFVIEAVERAATIAEAEGVNKIEATHLERILPQLLLDF 137
>UniRef50_UPI0000F2C002 Cluster: PREDICTED: similar to stimulated by
retinoic acid 13; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to stimulated by retinoic acid 13 -
Monodelphis domestica
Length = 106
Score = 46.4 bits (105), Expect = 0.001
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +3
Query: 264 ETCLRAVKQAQREGSNKVDVEHIEKCLPQLMLDF 365
E RA++QAQ E +KVD+E EK LPQL+LDF
Sbjct: 73 EAASRAIRQAQAEDQDKVDIEQFEKVLPQLLLDF 106
>UniRef50_A2FX12 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 81
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/69 (36%), Positives = 37/69 (53%)
Frame = +3
Query: 156 KDVIKXLLXNHFQXSKTKXAPHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDVEHIE 335
K +I+ L + K + P + L+A+ +C+V E RAV A E +D H+E
Sbjct: 13 KAIIESALADQNDDQKLRIPPTTVELIAEYLRCVVVEATERAVDVAGDE--KVIDESHLE 70
Query: 336 KCLPQLMLD 362
K LPQL+LD
Sbjct: 71 KILPQLLLD 79
>UniRef50_Q96DD4 Cluster: Stimulated by retinoic acid 13 homolog;
n=12; Eutheria|Rep: Stimulated by retinoic acid 13
homolog - Homo sapiens (Human)
Length = 63
Score = 43.2 bits (97), Expect = 0.010
Identities = 27/74 (36%), Positives = 39/74 (52%)
Frame = +3
Query: 144 STIKKDVIKXLLXNHFQXSKTKXAPHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDV 323
S +K+++ LL HF+ KTK E +R V+QAQ E + + DV
Sbjct: 8 SGFRKELVSRLLHLHFKDDKTK------------------EAAVRGVRQAQAEDALRADV 49
Query: 324 EHIEKCLPQLMLDF 365
+ +EK LPQL+LDF
Sbjct: 50 DQLEKVLPQLLLDF 63
>UniRef50_Q20071 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 79
Score = 41.5 bits (93), Expect = 0.029
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 150 IKKDVIKXLLXNHFQXSKT-KXAPHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDVE 326
IK+ ++ +L + K P AL +L + L E+ RA + A GS V E
Sbjct: 5 IKQSTVRSMLIVARRGKKRLNLDPDALAVLTALINLLAQESVARAAQSAANTGSRHVTKE 64
Query: 327 HIEKCLPQLMLDF 365
H+++ + QLMLDF
Sbjct: 65 HLKRVIAQLMLDF 77
>UniRef50_Q25AJ9 Cluster: H0510A06.6 protein; n=4;
Magnoliophyta|Rep: H0510A06.6 protein - Oryza sativa
(Rice)
Length = 111
Score = 41.1 bits (92), Expect = 0.038
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3
Query: 222 ALMLLADVAKCLVTETCLRAVKQAQREGSNKVDVEHIEKCLPQLMLDF 365
AL + ++ + VTE R+ A+ EG+ ++ H+E+ LPQL+LDF
Sbjct: 64 ALKVSCELLRIFVTEAVQRSAFIAEAEGTTTIEPTHLERVLPQLLLDF 111
>UniRef50_A2QA97 Cluster: Contig An01c0330, complete genome; n=5;
Trichocomaceae|Rep: Contig An01c0330, complete genome -
Aspergillus niger
Length = 216
Score = 41.1 bits (92), Expect = 0.038
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = +3
Query: 150 IKKDVIKXLLXNHFQXSKTKXAPHALMLLADVAKCLVTETCLR-------AVKQAQREGS 308
I ++ LL +HFQ KTK A A ++A V E R AV + G
Sbjct: 138 IPPKLLTRLLHHHFQNEKTKIAKDANTVVAKYVDVFVREALARAAFERSEAVGKGAAVGD 197
Query: 309 NKVDVEHIEKCLPQLMLDF 365
++VE +EK PQL++DF
Sbjct: 198 GFLEVEDLEKMAPQLVMDF 216
>UniRef50_Q9ZV97 Cluster: F9K20.17; n=1; Arabidopsis thaliana|Rep:
F9K20.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 145
Score = 39.5 bits (88), Expect = 0.12
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 255 LVTETCLRAVKQAQREGSNKVDVEHIEKCLPQLMLDF 365
L +E RA A+ EG K++ H+E+ LPQL+LDF
Sbjct: 109 LASEAVQRAAIIAEAEGMEKIEATHLERILPQLLLDF 145
>UniRef50_Q8MTP2 Cluster: Bm101; n=1; Bombyx mori|Rep: Bm101 -
Bombyx mori (Silk moth)
Length = 92
Score = 39.5 bits (88), Expect = 0.12
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -2
Query: 505 ELYSYGGRCDGKNETMLSSQTI 440
E Y GGRCDGKNETM+SSQTI
Sbjct: 4 EFYD-GGRCDGKNETMVSSQTI 24
>UniRef50_Q7SC05 Cluster: Predicted protein; n=2; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 203
Score = 37.1 bits (82), Expect = 0.62
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Frame = +3
Query: 147 TIKKDVIKXLLXNHFQXSKTKXAPHALMLLADVAKCLVTETCLRAVKQAQREGSNK---- 314
T+ +++ LL F+ KTK A +A V E R+V +REG N
Sbjct: 125 TVPSELLTRLLYEFFESDKTKITKDANEAVARYVDIFVREAIARSV--VEREGGNGTTSG 182
Query: 315 ----VDVEHIEKCLPQLMLD 362
++VE +EK PQL+LD
Sbjct: 183 GGGFLEVEDLEKIAPQLLLD 202
>UniRef50_A6RNU3 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 238
Score = 34.7 bits (76), Expect = 3.3
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 132 SNVXSTIKKDVIKXLLXNHFQXSKTKXAPHALMLLADVAKCLVTETCLRA--VKQAQREG 305
S +TI D++ ++ F T+ + A + V E R ++ G
Sbjct: 159 SETRTTIPNDLLSKIMHELFAEPNTRISKEANKAVGKYMDTFVREAIARVRYTERGSGRG 218
Query: 306 SNKVDVEHIEKCLPQLMLDF 365
+VE +EK PQL+LDF
Sbjct: 219 GGFWEVEDLEKMAPQLLLDF 238
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,381,746
Number of Sequences: 1657284
Number of extensions: 13412489
Number of successful extensions: 31101
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 30023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31096
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83621356644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -