Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C06
         (894 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003753-1|AAO41417.1|  343|Drosophila melanogaster RH05737p pro...    31   1.6  
AY051674-1|AAK93098.1|  366|Drosophila melanogaster LD22649p pro...    31   1.6  
AE014297-1831|AAG22152.1|  343|Drosophila melanogaster CG12207-P...    31   1.6  
AE014297-1830|AAN13603.1|  366|Drosophila melanogaster CG12207-P...    31   1.6  
AE014297-1829|AAN13602.1|  366|Drosophila melanogaster CG12207-P...    31   1.6  

>BT003753-1|AAO41417.1|  343|Drosophila melanogaster RH05737p
           protein.
          Length = 343

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 222 SRRG--ESRQXARPVQRPSDVAGRRRPSHPGPRDPSHMLGRSRCT 94
           SR G  + +Q  +P QRP  +AG       G  DPS M G   C+
Sbjct: 169 SRSGGNQQQQQQQPPQRPYSIAGELLVVQAGDEDPSMMHGHGGCS 213


>AY051674-1|AAK93098.1|  366|Drosophila melanogaster LD22649p
           protein.
          Length = 366

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 222 SRRG--ESRQXARPVQRPSDVAGRRRPSHPGPRDPSHMLGRSRCT 94
           SR G  + +Q  +P QRP  +AG       G  DPS M G   C+
Sbjct: 192 SRSGGNQQQQQQQPPQRPYSIAGELLVVQAGDEDPSMMHGHGGCS 236


>AE014297-1831|AAG22152.1|  343|Drosophila melanogaster CG12207-PA,
           isoform A protein.
          Length = 343

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 222 SRRG--ESRQXARPVQRPSDVAGRRRPSHPGPRDPSHMLGRSRCT 94
           SR G  + +Q  +P QRP  +AG       G  DPS M G   C+
Sbjct: 169 SRSGGNQQQQQQQPPQRPYSIAGELLVVQAGDEDPSMMHGHGGCS 213


>AE014297-1830|AAN13603.1|  366|Drosophila melanogaster CG12207-PC,
           isoform C protein.
          Length = 366

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 222 SRRG--ESRQXARPVQRPSDVAGRRRPSHPGPRDPSHMLGRSRCT 94
           SR G  + +Q  +P QRP  +AG       G  DPS M G   C+
Sbjct: 192 SRSGGNQQQQQQQPPQRPYSIAGELLVVQAGDEDPSMMHGHGGCS 236


>AE014297-1829|AAN13602.1|  366|Drosophila melanogaster CG12207-PB,
           isoform B protein.
          Length = 366

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 222 SRRG--ESRQXARPVQRPSDVAGRRRPSHPGPRDPSHMLGRSRCT 94
           SR G  + +Q  +P QRP  +AG       G  DPS M G   C+
Sbjct: 192 SRSGGNQQQQQQQPPQRPYSIAGELLVVQAGDEDPSMMHGHGGCS 236


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,330,913
Number of Sequences: 53049
Number of extensions: 647258
Number of successful extensions: 1705
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1705
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)