Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_C03
(841 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 85 9e-18
SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces po... 39 0.001
SPAC1D4.13 |byr1|ste1, ste3|MAP kinase kinase Byr1|Schizosacchar... 30 0.47
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 27 2.5
SPAP27G11.03 |||D123 family|Schizosaccharomyces pombe|chr 1|||Ma... 27 3.3
SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter family|Sch... 27 4.4
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 27 4.4
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 26 5.8
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 7.6
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 85.4 bits (202), Expect = 9e-18
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +1
Query: 73 PKLRDIILRSDKWHSVYNEVVESMHKMYNVGHLIHADLSEYNILWWDNKCWFIDVSQSVQ 252
PKL+DI + + +Y V +M +++V HL+HADLSEYN+L+ K +FIDVSQSV+
Sbjct: 253 PKLKDIDMTPGEATKLYQLVARNMRILFHVCHLVHADLSEYNLLYHKGKVYFIDVSQSVE 312
Query: 253 PDHPNGLEFLLRDCRNVVNFFEK 321
DHP ++FL D N+ FF +
Sbjct: 313 HDHPQSIDFLRMDILNISTFFRR 335
>SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 336
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 169 LIHADLSEYNILWW-DNKCWFIDVSQSVQPDHPNGLEFLLRDCRNVVNFFEK 321
LIH D +E+NI+ D ID Q V HP+ + RD + +V +FEK
Sbjct: 216 LIHGDFNEFNIIVREDGTAVVIDFPQMVSTSHPDAQFYFDRDVQCIVQYFEK 267
>SPAC1D4.13 |byr1|ste1, ste3|MAP kinase kinase
Byr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 29.9 bits (64), Expect = 0.47
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 118 VYNEVVESMHKMYNVGHLIHADLSEYNIL 204
+ N +V+ + +YNV H+IH DL N++
Sbjct: 165 IINSMVKGLIYLYNVLHIIHRDLKPSNVV 193
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 249 HRLRNINKPAFIIPPENVIL**ISMNQMTNIVHFMHTLHD 130
+ ++ I KPA+ E IL +S ++ NI+HF+ + D
Sbjct: 40 YAIKCIKKPAYTFLQEVNILRQLSRSRHRNIIHFVESFED 79
>SPAP27G11.03 |||D123 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 319
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 301 HYDNLEVKTPTH*GGQVAQTEKHQ*TSIYYPTRECYTLIDQ 179
H D++ V+ P + +V E + YYP RE LI++
Sbjct: 44 HEDSIYVEQPMNTVEEVDSEEDEESAPAYYPEREAIQLIEK 84
>SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 791
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 179 LIYQSITFSGGIINAGLLMFLSLCNLTTLMGWS 277
LI + I F G I G + +LC+ + GWS
Sbjct: 195 LIIEQIKFFGVNIGIGRAILFNLCSYLSSFGWS 227
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 88 IILRSDKWHSVYNEVVESMHKMYNVGHLIHADLSEYNILW 207
I+L D W S + V S YN +++++ + +I+W
Sbjct: 444 ILLSPDDWASSWYSTVRSQLDSYNCQFVVNSNQPKDSIMW 483
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 319 KKGVSHVQTAEELLNQ*PALMKLM*TYWKEFIPHTILWHAXFEIP 453
+KG++ + T L + PA + Y+KEF+ H+ +A + IP
Sbjct: 143 RKGLNGLFTTRALASYLPAQEAVYNKYFKEFLAHSKDDYAQYMIP 187
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/66 (22%), Positives = 32/66 (48%)
Frame = +2
Query: 149 KCTMLVI*FMLIYQSITFSGGIINAGLLMFLSLCNLTTLMGWSFYFEIVVMLSISLKKRG 328
+C +L F+L + S +FS + +F+ + ++ + F+F + V + +S
Sbjct: 114 RCLLLFFFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVFLSFLFSL 173
Query: 329 SHMCKL 346
SH+ L
Sbjct: 174 SHLLSL 179
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,499,914
Number of Sequences: 5004
Number of extensions: 46516
Number of successful extensions: 141
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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