Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C03
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0444 + 3357048-3357425,3357841-3357969,3358165-3358284,335...   101   7e-22
01_06_1610 - 38625427-38625726,38625814-38625885,38626001-386261...    38   0.008
01_06_0634 + 30746767-30747012,30747083-30747118,30747554-307478...    33   0.21 
07_01_0684 - 5161218-5161427,5161509-5161616,5162217-5162390,516...    31   1.1  
03_06_0352 - 33312443-33312652,33312747-33312854,33313224-333133...    31   1.1  
01_05_0175 - 18936752-18937621,18938855-18941641                       31   1.5  

>07_01_0444 +
           3357048-3357425,3357841-3357969,3358165-3358284,
           3358661-3358753,3358935-3359014,3359180-3359293,
           3359530-3359603,3359757-3359833,3360558-3360641,
           3360732-3360824,3360901-3361008,3361130-3361204,
           3361507-3361911
          Length = 609

 Score =  101 bits (242), Expect = 7e-22
 Identities = 48/106 (45%), Positives = 69/106 (65%)
 Frame = +1

Query: 46  YLGRITTPAPKLRDIILRSDKWHSVYNEVVESMHKMYNVGHLIHADLSEYNILWWDNKCW 225
           ++G+    AP+L+D  L  DK    Y E++ +M  +Y    L+H DLSEYNIL+++   +
Sbjct: 328 FIGKGGWAAPRLKDAALSDDKLRESYFELITTMRTLYQKCKLVHGDLSEYNILYFEGHLY 387

Query: 226 FIDVSQSVQPDHPNGLEFLLRDCRNVVNFFEKKGVSHVQTAEELLN 363
            IDVSQSV  DHP+ LEFL  DC +V +FF+K+GV+ V +  EL N
Sbjct: 388 IIDVSQSVDLDHPSALEFLKEDCLHVTDFFKKRGVA-VMSVTELFN 432


>01_06_1610 -
           38625427-38625726,38625814-38625885,38626001-38626117,
           38626509-38626674,38626768-38626815,38626889-38626962,
           38627126-38627243,38627332-38627420,38627512-38627687,
           38627785-38627898,38627981-38628051,38628431-38628477,
           38628581-38628721,38629095-38629136
          Length = 524

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 169 LIHADLSEYNILWWDN-KCWFIDVSQSVQPDHPNGLEFLLRDCRNVVNFFEKK 324
           LIH D +E+NI+  D+ K   ID  Q V   H N   F  RD   +  FF K+
Sbjct: 255 LIHCDFNEFNIMIDDDEKVTMIDFPQMVSVKHRNAQMFFDRDIECIYKFFRKR 307


>01_06_0634 +
           30746767-30747012,30747083-30747118,30747554-30747850,
           30748482-30748544,30748643-30748696,30748837-30748854,
           30749554-30749625,30749731-30749787,30750160-30750236,
           30751013-30751094,30751585-30751701,30752083-30752210,
           30753074-30753143,30753725-30753765,30753963-30753990,
           30754151-30754210
          Length = 481

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 91  ILRSDKWHSVYNEVVESMHKMYNVGHLIHADLSEYNILWWDNK 219
           I+ +DKW  +Y  + E +  +YN G+ +    +E NI  W+ K
Sbjct: 307 IVGADKWSLLYESIPEKLQILYNDGYKLVIFTNESNIERWNKK 349


>07_01_0684 -
           5161218-5161427,5161509-5161616,5162217-5162390,
           5162515-5162643,5162722-5163009,5163114-5163346,
           5164235-5165060
          Length = 655

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 94  LRSDKWHSVYNEVVESMHKMY--NVGHLIHADLSEYNILWWDNK 219
           LRS KW   Y E  E  +  Y    G++I AD++ Y +  +DN+
Sbjct: 540 LRSGKWAVTYEEWPEEAYPNYANGPGYVISADIARYIVSEFDNQ 583


>03_06_0352 -
           33312443-33312652,33312747-33312854,33313224-33313397,
           33313489-33313695,33313700-33313987,33314087-33314319,
           33314450-33315263
          Length = 677

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 94  LRSDKWHSVYNEVVESMHKMY--NVGHLIHADLSEYNILWWDNK 219
           LRS KW   Y E  E ++  Y    G++I +D+++Y +  +DN+
Sbjct: 562 LRSGKWSVSYEEWQEEVYPPYANGPGYVISSDIAQYIVSEFDNQ 605


>01_05_0175 - 18936752-18937621,18938855-18941641
          Length = 1218

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +1

Query: 124  NEVVESMHKMYNVGHLIHADLSEYNILWWDNKCWFIDVSQSVQPDHP 264
            N + E++ ++ N  H++HADLSEY  +  D KC  +    +   D P
Sbjct: 938  NMISENLGRICNA-HVVHADLSEYGAM--DEKCIHLAELAATAVDFP 981


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,297,361
Number of Sequences: 37544
Number of extensions: 315535
Number of successful extensions: 750
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)