Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C03
         (841 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   2.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   2.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   4.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   4.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   6.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.1  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 91  ILRSD-KWHSVYNEVVESMHKMYNV-GHLIHADLSEYN 198
           IL +D KWH++Y+E      K  N+ G++I  +   YN
Sbjct: 343 ILNNDGKWHNIYSE------KGLNILGNIIEGNADSYN 374


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 91  ILRSD-KWHSVYNEVVESMHKMYNV-GHLIHADLSEYN 198
           IL +D KWH++Y+E      K  N+ G++I  +   YN
Sbjct: 343 ILNNDGKWHNIYSE------KGLNILGNIIEGNADSYN 374


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +1

Query: 220 CWFIDVSQSVQPDHPNGLEFLLRDCRNVVNFFEKKGVSHVQTAEE 354
           C   D+  +V+P      E +L     V     KKGV  V  +EE
Sbjct: 246 CKLNDILLTVRPHLELTFENILSHINTVYVLRTKKGVMRVDASEE 290


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +1

Query: 220 CWFIDVSQSVQPDHPNGLEFLLRDCRNVVNFFEKKGVSHVQTAEE 354
           C   D+  +V+P      E +L     V     KKGV  V  +EE
Sbjct: 246 CKLNDILLTVRPHLELTFENILSHINTVYVLRTKKGVMRVDASEE 290


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 496 PXFKGIXNILDYHRGGFQXRHAREXY 419
           P FKG+ ++ D   G  +  ++ E +
Sbjct: 286 PEFKGVLDVKDVEEGNVEETNSEETH 311


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 496 PXFKGIXNILDYHRGGFQXRHAREXY 419
           P FKG+ ++ D   G  +  ++ E +
Sbjct: 201 PEFKGVLDVKDVEEGNVEETNSEETH 226


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 496 PXFKGIXNILDYHRGGFQXRHAREXY 419
           P FKG+ ++ D   G  +  ++ E +
Sbjct: 520 PEFKGVLDVKDVEEGNVEETNSEETH 545


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,103
Number of Sequences: 438
Number of extensions: 3632
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)