Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C01
         (912 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    56   1e-06
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    49   1e-04
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    44   0.004
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    39   0.20 
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    39   0.20 
UniRef50_Q1HMI7 Cluster: Formin B; n=4; Trypanosoma cruzi|Rep: F...    37   0.82 

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 56.0 bits (129), Expect = 1e-06
 Identities = 37/93 (39%), Positives = 40/93 (43%)
 Frame = +3

Query: 633 TSITKIDAQVXGGKTXQDYXXTRXFPPXKPPRCALLFXXXXXXXXXXXXXXXSGKRGXXP 812
           TSITKIDAQV GG+T QDY  TR F P + P CALLF                  R    
Sbjct: 24  TSITKIDAQVRGGETRQDYKDTRRF-PLEAPSCALLFRPCRLPDTCPPFSLREAWR--FL 80

Query: 813 IXHXXRFPXSPXKSXPPXWAFXPXPPXKPNXXP 911
           I H         +S  P WA    PP  P   P
Sbjct: 81  IAHAVGISVR-CRSFAPSWAVCTNPPFSPTAAP 112


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 24/37 (64%), Positives = 26/37 (70%)
 Frame = +3

Query: 633 TSITKIDAQVXGGKTXQDYXXTRXFPPXKPPRCALLF 743
           TSITK DAQ+ GG+T QDY  TR F P   P CALLF
Sbjct: 60  TSITKSDAQISGGETRQDYKDTRRF-PLAAPSCALLF 95


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 44.4 bits (100), Expect = 0.004
 Identities = 22/37 (59%), Positives = 24/37 (64%)
 Frame = +3

Query: 633 TSITKIDAQVXGGKTXQDYXXTRXFPPXKPPRCALLF 743
           TSI K DAQ+ GG+T QDY   R F P   P CALLF
Sbjct: 92  TSIAKSDAQISGGETRQDYKDPRRF-PLVAPSCALLF 127


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 38.7 bits (86), Expect = 0.20
 Identities = 24/42 (57%), Positives = 25/42 (59%)
 Frame = +1

Query: 427 SSASPPTDSLXSVVRXGGAVSXXSKAXIXPXPESGDXXXXNI 552
           SSAS  TDSL SVVR   AVS  SKA I    ESGD    N+
Sbjct: 18  SSASSLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 38.7 bits (86), Expect = 0.20
 Identities = 19/38 (50%), Positives = 20/38 (52%)
 Frame = -3

Query: 559 LVKCXFXXXPLIXGXAVXPPLXEXIPLPPXERPSXGSQ 446
           L+ C F   PLI    V PPL E  PL   ERPS  SQ
Sbjct: 24  LLTCSFRLYPLILWITVLPPLSELTPLAAVERPSVASQ 61


>UniRef50_Q1HMI7 Cluster: Formin B; n=4; Trypanosoma cruzi|Rep:
           Formin B - Trypanosoma cruzi strain CL Brener
          Length = 968

 Score = 36.7 bits (81), Expect = 0.82
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +2

Query: 674 NPTGLXXYQXVSPXKAPPVRSPXSXPXPXPDTLSNFPPFGXAWGPPHXXXXXVSPFP 844
           +P+ +   Q VSP  +PP R+P   P P P   +  PP      PPH       P P
Sbjct: 450 DPSSIPTNQPVSPSSSPPPRTPPPPPPPPPGKNAPPPPPPPPPPPPHGKKAPPPPPP 506


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,811,144
Number of Sequences: 1657284
Number of extensions: 6775927
Number of successful extensions: 19277
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18598
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)