Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_C01
         (912 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U54982-2|AAC16666.1| 1262|Drosophila melanogaster stn-B protein.       29   6.7  
BT011172-1|AAR88533.1| 1262|Drosophila melanogaster RH38069p pro...    29   6.7  
AE014298-3231|ABI31012.1| 1260|Drosophila melanogaster CG12473-P...    29   6.7  
AE014298-3230|EAA46059.2| 1260|Drosophila melanogaster CG12473-P...    29   6.7  

>U54982-2|AAC16666.1| 1262|Drosophila melanogaster stn-B protein.
          Length = 1262

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 17/56 (30%), Positives = 21/56 (37%)
 Frame = +2

Query: 677 PTGLXXYQXVSPXKAPPVRSPXSXPXPXPDTLSNFPPFGXAWGPPHXXXXXVSPFP 844
           PT +   Q   P  A P++ P   P P P      PP   A   P      V+P P
Sbjct: 215 PTAVPNIQAAVPLPATPIKQPPRPPPPRPAPPRPAPPGQAAPQRPPPPLAAVNPPP 270


>BT011172-1|AAR88533.1| 1262|Drosophila melanogaster RH38069p
           protein.
          Length = 1262

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 17/56 (30%), Positives = 21/56 (37%)
 Frame = +2

Query: 677 PTGLXXYQXVSPXKAPPVRSPXSXPXPXPDTLSNFPPFGXAWGPPHXXXXXVSPFP 844
           PT +   Q   P  A P++ P   P P P      PP   A   P      V+P P
Sbjct: 215 PTAVPNIQAAVPLPATPIKQPPRPPPPRPAPPRPAPPGQAAPQRPPPPLAAVNPPP 270


>AE014298-3231|ABI31012.1| 1260|Drosophila melanogaster CG12473-PB,
           isoform B protein.
          Length = 1260

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 17/56 (30%), Positives = 21/56 (37%)
 Frame = +2

Query: 677 PTGLXXYQXVSPXKAPPVRSPXSXPXPXPDTLSNFPPFGXAWGPPHXXXXXVSPFP 844
           PT +   Q   P  A P++ P   P P P      PP   A   P      V+P P
Sbjct: 215 PTAVPNIQAAVPLPATPIKQPPRPPPPRPAPPRPAPPGQAAPQRPPPPLAAVNPPP 270


>AE014298-3230|EAA46059.2| 1260|Drosophila melanogaster CG12473-PA,
           isoform A protein.
          Length = 1260

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 17/56 (30%), Positives = 21/56 (37%)
 Frame = +2

Query: 677 PTGLXXYQXVSPXKAPPVRSPXSXPXPXPDTLSNFPPFGXAWGPPHXXXXXVSPFP 844
           PT +   Q   P  A P++ P   P P P      PP   A   P      V+P P
Sbjct: 215 PTAVPNIQAAVPLPATPIKQPPRPPPPRPAPPRPAPPGQAAPQRPPPPLAAVNPPP 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,775,832
Number of Sequences: 53049
Number of extensions: 357138
Number of successful extensions: 1015
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)