Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_B23
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast... 143 2e-34
AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical ... 37 0.023
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 36 0.053
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 34 0.16
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 33 0.38
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 33 0.38
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 33 0.38
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 33 0.38
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 33 0.38
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 33 0.38
AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical ... 32 0.50
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 32 0.66
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 32 0.66
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 32 0.66
AF016677-6|AAB66145.3| 340|Caenorhabditis elegans Hypothetical ... 32 0.66
U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical pr... 31 1.1
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 31 1.1
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 31 1.1
AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical ... 31 1.1
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 31 1.5
U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF016677-4|AAL11109.2| 304|Caenorhabditis elegans Hypothetical ... 31 1.5
U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 30 2.0
AF016677-5|AAB66143.1| 128|Caenorhabditis elegans Hypothetical ... 30 2.0
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 30 2.0
Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical pr... 30 2.7
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 30 2.7
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 30 2.7
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 30 2.7
AF016677-3|AAL11110.2| 216|Caenorhabditis elegans Hypothetical ... 30 2.7
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 30 2.7
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 29 3.5
AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical ... 29 3.5
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 29 3.5
AC084159-14|AAK39369.2| 480|Caenorhabditis elegans Hypothetical... 29 4.6
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 28 8.1
U14634-1|AAA21559.1| 222|Caenorhabditis elegans Hypothetical pr... 28 8.1
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 28 8.1
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 28 8.1
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 28 8.1
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 28 8.1
AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical ... 28 8.1
AF016677-2|AAB66146.1| 292|Caenorhabditis elegans Hypothetical ... 28 8.1
>U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 4, isoform a protein.
Length = 796
Score = 143 bits (346), Expect = 2e-34
Identities = 62/128 (48%), Positives = 82/128 (64%)
Frame = +2
Query: 377 ECPLCMEPLEVDDLHFYPCTCGYQICRFCWNRIREGENGLCPACRKAYPENPADFIPLSQ 556
ECPLCME LE+DD++FYPC C YQICRFCW+RIR ENGLCPACR+ YPE+P +F P++
Sbjct: 12 ECPLCMETLELDDINFYPCKCEYQICRFCWHRIRTDENGLCPACRQPYPEDPVNFKPMTT 71
Query: 557 EQVAAIKTEKKAREQKRRNKTLESRRALAXXXXXXXXXXXXXGLPVRLADPEI*NGKSTL 736
+ V K E++ ++Q + K ++R+ L GL R+ADPEI
Sbjct: 72 DDVRKHKDEQRLKKQAEKLKLSDARQYLCNYRVLQKNLVYVVGLSPRVADPEILKKNEYF 131
Query: 737 GKYGKFTK 760
G+YGK K
Sbjct: 132 GRYGKIQK 139
>AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical
protein F43C11.7 protein.
Length = 295
Score = 36.7 bits (81), Expect = 0.023
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 374 VECPLCMEPLE--VDDLHFYPCTCGYQICRFCWNRIREGENGLCPACRK 514
++C +C E + + H TCG+ IC+ C +++ LCP CRK
Sbjct: 4 LKCGVCTEDYSNVITNRHPKNLTCGHSICKACSSKLVSNFKILCPFCRK 52
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 35.5 bits (78), Expect = 0.053
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 523 RKPGRLHSSQSRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRVRRGPARQTR 702
RK R HSS R G + +ES R S+ R + ERSRR+ + R R P R +R
Sbjct: 244 RKRKRSHSSSDRRGR--RTSKESRRRSRSRDTHRTRRRSPERSRRSTETRNER-PERPSR 300
Query: 703 -RPGDLKRQEY 732
R +R+EY
Sbjct: 301 WRSRSRERKEY 311
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 33.9 bits (74), Expect = 0.16
Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Frame = +2
Query: 365 EEQVECPLCMEPLEVDDLHFYPCT--CGYQICRFCWNRIREGENGLCPACRKAYPENP-- 532
+E C +C+ D PC CG+ CRFC N CP CR A+ NP
Sbjct: 3 DEDFCCAVCL------DFFVEPCIIECGHSYCRFCIES-HLNINEKCPLCR-AHTGNPIR 54
Query: 533 ---ADFIPLSQEQVAAIKTEKKAREQKRRNKTLESRRAL 640
+ + +S I TE R + + K L RAL
Sbjct: 55 NRQLESLTMSYVSSRNISTEYYERMKSYQKKLLLQNRAL 93
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +1
Query: 517 IPRKPGRLHSSQSRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRVRRGPARQ 696
+ R+ + Q+RA + K+ +AET A+V A A R + ++ RVR+ A Q
Sbjct: 630 VARQQAMMKQEQARAQAAAKEAARL-KAETEAAKAKVQAEAEARRKAEQEMRVRQAQAAQ 688
Query: 697 TR 702
T+
Sbjct: 689 TQ 690
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +1
Query: 517 IPRKPGRLHSSQSRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRVRRGPARQ 696
+ R+ + Q+RA + K+ +AET A+V A A R + ++ RVR+ A Q
Sbjct: 2009 VARQQAMMKQEQARAQAAAKEAARL-KAETEAAKAKVQAEAEARRKAEQEMRVRQAQAAQ 2067
Query: 697 TR 702
T+
Sbjct: 2068 TQ 2069
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 547 SQSRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRVRRGPARQTRR 705
++ + G+D+ G SPR + R R RSR ++ R RR +R + R
Sbjct: 72 ARGKPRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSR 124
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 547 SQSRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRVRRGPARQTRR 705
++ + G+D+ G SPR + R R RSR ++ R RR +R + R
Sbjct: 72 ARGKPRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSR 124
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 547 SQSRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRVRRGPARQTRR 705
++ + G+D+ G SPR + R R RSR ++ R RR +R + R
Sbjct: 72 ARGKPRGNDRHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSR 124
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 353 NQSGEEQVECPLCMEPLE--VDDLHFYPCTCGYQICRFCWNRIREGENGLCPACR 511
N + +EC +C VD+ CG+ IC+ C +++ + LCP CR
Sbjct: 125 NTDSKSNIECEICTLEFSSVVDNQIPRILQCGHSICQSCASKLAKNCVILCPFCR 179
>AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical
protein F43C11.8 protein.
Length = 338
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +2
Query: 437 CGYQICRFCWNRIREGENGLCPACRKAYPENPADFIPLSQEQVAAIKTEKKAREQK 604
CG+ IC C ++ + LCP CR+A + + + + A++ K E+K
Sbjct: 42 CGHTICHGCAEKLLQNSMILCPFCREATNVSTVKDLQKNFALLQAVEHAKTRTEEK 97
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 377 ECPLCMEPLEVDDLHFYPCTCGYQICRFCWNRIREGENGLCPACRKAYPEN 529
ECP+C + V P CG++ C C + + G CP CR N
Sbjct: 11 ECPICQCKMIVPTT--IPA-CGHKFCFICLKGVYMNDMGGCPMCRGPIDSN 58
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +2
Query: 380 CPLCMEPLEVDDLHFYPCTCGYQICRFCWNRIREGENGLCPACRK 514
C +C E + CG+ IC C +++ E CP CR+
Sbjct: 6 CEICEESYRSESRIPKNLNCGHVICPVCASKLFENPEVKCPTCRQ 50
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 350 LNQSGEEQVECPLCMEPLEVDDLHFYPCTCGYQICRFCWNRIR 478
L+ E+ +CP+C ++ F TCG++IC+ C+ ++R
Sbjct: 1336 LDGETEDIFDCPICCASIDC----FMVFTCGHRICQNCFEKMR 1374
>AF016677-6|AAB66145.3| 340|Caenorhabditis elegans Hypothetical
protein ZK1240.2 protein.
Length = 340
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +2
Query: 374 VECPLCMEPLE-VDDLHFYPCT-CGYQICRFCWNRIREGENGLCPACRKAYPENPADFIP 547
++C +C E + D++ CG+ C C ++ LCP CR+A + +
Sbjct: 4 IDCEICDEEFSTLTDVNIPRILRCGHTTCHGCAEKLLRNSTILCPFCREATNVSAVKDLQ 63
Query: 548 LSQEQVAAIKTEKKAREQK 604
+ + A++ K E+K
Sbjct: 64 KNFALLQAVEHTKTKTEEK 82
>U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical
protein W09C3.2 protein.
Length = 460
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 544 SSQSRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRVRRGPARQT-RRPGDLK 720
S++S+ SD++ E P+ +S ++ + + E+S+R +R +Q R+ D
Sbjct: 191 SNRSKRSSSDREEREKPKMISSTKNIKSKESSNEKSQRGS---IRTSAVKQVCRKNLDFL 247
Query: 721 RQEYF 735
+QEYF
Sbjct: 248 QQEYF 252
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 530 PADFIPLSQEQVAAIKTEKKAREQKRRNKTLESRR 634
P ++PL++EQ+AA + EK A+ ++R T + R
Sbjct: 529 PIYYLPLTEEQIAAKEAEKSAKGKERAETTSDRDR 563
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 434 TCGYQICRFCWNRIREGENGLCPACR 511
+CG++ C C + NG CP CR
Sbjct: 39 SCGHKFCFICLKGVSVSNNGDCPICR 64
>AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical
protein B0281.3 protein.
Length = 331
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 323 LALGSRMSVLNQSGEEQVECPLCMEPLEVDDLHFYPCTCGYQICRFC-WNRIREGENGLC 499
L G +LN S ++ CP C EP EV + + + + + E E +
Sbjct: 61 LCEGCIKKLLNYS---RIVCPFCREPTEVPGNNIKSLHKNFSLIQVIKTTLVEEAEARII 117
Query: 500 PACRKAYPENPADF 541
P C KA+P N A+F
Sbjct: 118 PKC-KAHPYNLAEF 130
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Frame = +2
Query: 335 SRMSVLNQSGEEQVECPLCMEPLEVDDLHFYPCTCGYQICRFC-------WNRIREGENG 493
SR+ ++ ++ + C +C + CG+ C C N E
Sbjct: 48 SRIDIIREAADNVQSCRVCYDEYHSSSNQARVLQCGHTFCTRCVVGCSSTMNNTSEEFGI 107
Query: 494 LCPACRKAYPENPADFIPLSQEQVAAIKT 580
CP CRK + PA +P++ + + + T
Sbjct: 108 KCPECRKINEQVPAT-VPINFQLMQILTT 135
>U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical
protein T20F5.7 protein.
Length = 294
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +2
Query: 374 VECPLCMEPLEVDDLHFYPCTCGYQICRFCWNRIREGENGL----CPACRKAYPENPADF 541
V C +C+ + CG+ +C C + +R+ L CP CR+ + + P
Sbjct: 13 VTCLICIREFDTKTRKPKVLHCGHTVCEECTDNLRDFNAPLLVVRCPTCRQ-FTKRPVAE 71
Query: 542 IPLSQEQVAAIKTEKKAREQKRRNK 616
+ Q+ EK+ E++++ K
Sbjct: 72 SCNTNFQLMGYLAEKEKFEREKKAK 96
>AF016677-4|AAL11109.2| 304|Caenorhabditis elegans Hypothetical
protein ZK1240.3 protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 377 ECPLCMEPLEVDDLHFYP--CTCGYQICRFCWNRIREGENGLCPACRK 514
EC +C + D + P CG+ IC+ C ++ CP CR+
Sbjct: 5 ECEICCKEYSNIDQNHSPKILKCGHSICQICAAKLITNSCIYCPFCRE 52
>U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical
protein C28G1.5 protein.
Length = 101
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = +2
Query: 377 ECPLCMEPLEVDDLHFYP--CTCGYQICRFCWNRIREGENGLCPACR 511
+C +C + D P TCG+ +C C + CP CR
Sbjct: 5 KCKICFDRFSDTDSEHIPRNLTCGHALCHKCITAMVNNSTVECPFCR 51
>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 353 NQSGEE--QVECPLCMEPLEVDDLHFYPCTCGYQICRFCWN 469
N+ EE + CP+C + + FY CG+ +CR C N
Sbjct: 793 NREAEEIPNLVCPICTAETGISN-DFYRLECGHVMCRTCIN 832
>AF016677-5|AAB66143.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1240.6 protein.
Length = 128
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 377 ECPLCMEPL-EVDDLHF-YPCTCGYQICRFCWNRIREGENGLCPAC 508
EC +C E +VD+ H TCG+ IC+ C + LC C
Sbjct: 5 ECKVCNENYSDVDESHVPRVLTCGHSICQSCAAKQMSNSLILCKTC 50
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 520 PRKPGRLHSSQSRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRV 675
PRK + ++ + ++D EESP+ TS + + A+E S + V
Sbjct: 523 PRKSSKKSAAVEESDNEEEDVEESPKKRTSPRKSSKKRAAKEESEESSDNEV 574
>Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical
protein F43G6.8 protein.
Length = 263
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +2
Query: 380 CPLCMEPLEVDDLHFYP--CTCGYQICRFCWNRIREGENGLCPACR 511
C +C D + P CG+ +C C ++ G+ CP CR
Sbjct: 199 CEICAHQFSHSD-EYVPRVLVCGHTLCTSCIEKLDVGDGIRCPFCR 243
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 500 PACRKAYPENPADFIPLSQEQVAAIKTEKKAREQKRRNKTLESRRA 637
PAC P DF P S +A EKK E+K K E ++A
Sbjct: 44 PACSTI---KPTDFPPASAAPIAPKGEEKKEEEKKEEEKKEEEKKA 86
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +2
Query: 335 SRMSVLNQSGEEQVECPLCMEPLEVDDLHFYP--CTCGYQICRFCWNRIREGENG--LCP 502
SR+ S +VEC +C L D+ P CG+ IC C +RI E G CP
Sbjct: 161 SRLENEKSSLASRVECTICY--LSYDNEARVPRVMKCGHTICHTCVDRIIEQSFGSPKCP 218
Query: 503 ACRK 514
RK
Sbjct: 219 FDRK 222
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +2
Query: 335 SRMSVLNQSGEEQVECPLCMEPLEVDDLHFYP--CTCGYQICRFCWNRIREGENG--LCP 502
SR+ S +VEC +C L D+ P CG+ IC C +RI E G CP
Sbjct: 161 SRLENEKSSLASRVECTICY--LSYDNEARVPRVMKCGHTICHTCVDRIIEQSFGSPKCP 218
Query: 503 ACRK 514
RK
Sbjct: 219 FDRK 222
>AF016677-3|AAL11110.2| 216|Caenorhabditis elegans Hypothetical
protein ZK1240.9 protein.
Length = 216
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 374 VECPLCMEPL-EVDDLHFYPCT-CGYQICRFCWNRIREGENGLCPACRK 514
++C +C E ++D+ H CG+ +C+ C ++ +CP CR+
Sbjct: 4 LQCEVCNEDYSDIDEDHIPKVLKCGHSVCQNCATQLITALLIICPFCRE 52
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 547 SQSRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRVR-RGPARQTRR 705
S SR+ S + SP + ++ R + + R RR + PR R R P R+TRR
Sbjct: 61 SDSRSRSSSPVVKNSP-PKRKREPIRAPSASPPRRRRDDSPRKRSRSPPRRTRR 113
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +1
Query: 553 SRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRVRRGPARQTRRP 708
S GG D+ SPRAE +R RSR + R R +R P
Sbjct: 204 SGGGGRDRSRSRSPRAERRASPKYSPRRSRSRSRSRSRSRSRSASRSPSRSP 255
>AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical
protein Y40B1B.7 protein.
Length = 123
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 622 RVAACARERSRRTEQPRVRRGPARQTRRPGDLKRQEYFGKVWQIHKVVITKVRLCRS 792
RV RE+ + Q + R ++ RR + ++ E K+ +IHK+ TK R RS
Sbjct: 56 RVQDNIREKQVQERQEKKERKVEQEKRRLENERKAEIVQKITKIHKLKKTKKRQLRS 112
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +1
Query: 553 SRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRVRRGPARQTRRP 708
S GG D+ SPRAE +R RSR + R R +R P
Sbjct: 204 SGGGGRDRSRSRSPRAERRASPKYSPRRSRSRSRSRSRSRSRSASRSPSRSP 255
>AC084159-14|AAK39369.2| 480|Caenorhabditis elegans Hypothetical
protein Y73B3A.6 protein.
Length = 480
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 380 CPLCMEPLEVDDLHFYPC 433
C +C E VDD HF PC
Sbjct: 462 CQICFEHFVVDDQHFCPC 479
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 338 RMSVLNQSGEEQVECPLCMEPLEVDDLHFYPCTCGYQICRFC-WNRIREGE-NGLCPACR 511
+++ N E + ECP+C + +D CG+ +C C + I E + +CP R
Sbjct: 176 KLTESNAKQESRKECPICCWNYDNEDRLPRVMDCGHTMCHTCIISTINESDTEPICPFDR 235
Query: 512 K 514
+
Sbjct: 236 E 236
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 377 ECPLCMEPLEVDDLHFYPC--TCGYQICRFCWNRIREGENGLCPACRK 514
EC +C E D PC TCG+ IC C +++ + CP C +
Sbjct: 8 ECIICYN--EYDTELRKPCIGTCGHSICESCKHQMVSSK---CPQCNR 50
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical protein
F57C7.4 protein.
Length = 1484
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 645 TFASYRTTSCSSWACPS-DSQTRRFKTARVLW-ESMANSQSSY 767
TF+SY +S SSW C S S T R+ W + A +SY
Sbjct: 1064 TFSSYFASSYSSWNCGSGTSSTCRYVCLGTAWISNQALGDNSY 1106
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 538 LHSSQSRAGGSDKDGEESPRAETSQ--QDARVAACARER-SRRTEQ 666
LHSS S AGG D E P Q ++R + AR R S R E+
Sbjct: 428 LHSSGSGAGGGGGDVESKPATPAVQTPDESRATSTARSRESARKEK 473
>U14634-1|AAA21559.1| 222|Caenorhabditis elegans Hypothetical
protein T15B12.1a protein.
Length = 222
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = -3
Query: 510 RQAGQRPFSPSRIRFQQNRHIWYPHVHG*KWRSSTSKGSIHSGHSTCSSPL*FSTDILDP 331
RQ + +R+ QNR YP+V+ + SS + G +P F LDP
Sbjct: 108 RQLNPNSIKDALLRWIQNRVAGYPNVNVTNFSSSWADGMAFCALIHRFAPNSFDFSKLDP 167
Query: 330 RANSSNLPIAMKQSQ 286
N +A K ++
Sbjct: 168 NNRRYNFDLAFKVAE 182
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 371 QVECPLCMEPLEVDDLHFY 427
Q+ CPLC E L+ + HFY
Sbjct: 3 QLVCPLCCETLKEEGAHFY 21
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 538 LHSSQSRAGGSDKDGEESPRAETSQ--QDARVAACARER-SRRTEQ 666
LHSS S AGG D E P Q ++R + AR R S R E+
Sbjct: 428 LHSSGSGAGGGGGDVESKPATPAVQTPDESRATSTARSRESARKEK 473
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 535 RLH-SSQSRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRVRRGPARQTRR 705
++H +S+ R S + SPR ++ R + +RERS R ++ +R +R+ RR
Sbjct: 129 KMHKTSRERDRESHRKRSNSPRDRDRKRGKRSRSRSRERSYRDDRRDRKRSRSRERRR 186
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 535 RLH-SSQSRAGGSDKDGEESPRAETSQQDARVAACARERSRRTEQPRVRRGPARQTRR 705
++H +S+ R S + SPR ++ R + +RERS R ++ +R +R+ RR
Sbjct: 255 KMHKTSRERDRESHRKRSNSPRDRDRKRGKRSRSRSRERSYRDDRRDRKRSRSRERRR 312
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 365 EEQVECPLCMEPLEVDDLHFYPCTCGYQICRFC 463
EE+++C +C+ E D + TCG+ +CR C
Sbjct: 2 EEELKCTICIRFFE-DPIIL---TCGHSLCRMC 30
>AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical
protein ZK1240.1 protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 374 VECPLC-MEPLEV-DDLHFYPCTCGYQICRFCWNRIREGENGLCPACRK 514
+EC +C +E V +D CG+ +C+ C ++ + CP CR+
Sbjct: 5 IECEICNLEFSSVNEDQVPRILKCGHSVCQCCATKLLKNSAISCPFCRE 53
>AF016677-2|AAB66146.1| 292|Caenorhabditis elegans Hypothetical
protein ZK1240.5 protein.
Length = 292
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +2
Query: 371 QVECPLCMEPLEVDDLHFYPCTCGYQICRFCWNRIREGENGL--CPACRKAYPENPADFI 544
++ CP C EP E+ + + + + + E CP K +P N A+F+
Sbjct: 41 RIVCPFCREPTEIPGNTIKSLHKNFSLIQMIQTKTTDVEKSSENCPPKCKEHPSNLAEFV 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,450,715
Number of Sequences: 27780
Number of extensions: 373447
Number of successful extensions: 1299
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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