Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_B20
         (900 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   400   e-114
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   350   9e-99
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    26   0.41 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   1.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   1.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.8  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   6.6  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   8.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.8  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  400 bits (985), Expect = e-114
 Identities = 179/223 (80%), Positives = 199/223 (89%)
 Frame = +2

Query: 209 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 388
           VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH GFK
Sbjct: 34  VFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFK 93

Query: 389 KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSG 568
           KTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFNPCLTE+QYKEME+KVS 
Sbjct: 94  KTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSS 153

Query: 569 TLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGXRFLQXXNACRFWXTGRGIYHNE 748
           TLS LEGELKGTFYPLTGMSKETQQ+LIDDHFLFKEG RFLQ  NACRFW TGRGIYHN+
Sbjct: 154 TLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHND 213

Query: 749 NKTFLVWCXREDHLRIISMQMGGDLAXGVQKAGEPXQQXQKKI 877
           +KTFLVWC  EDHLRIISMQMGGDL    ++      + +K++
Sbjct: 214 DKTFLVWCNEEDHLRIISMQMGGDLGQVYRRLVHAVNEIEKRL 256



 Score = 29.5 bits (63), Expect = 0.044
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +3

Query: 108 MVDAATLEKLEAGFSKL 158
           MVD A L+KLE GFSKL
Sbjct: 1   MVDQAVLDKLETGFSKL 17


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  350 bits (861), Expect = 9e-99
 Identities = 157/183 (85%), Positives = 171/183 (93%)
 Frame = +2

Query: 209 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 388
           VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH GFK
Sbjct: 18  VFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFK 77

Query: 389 KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSG 568
           KTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFNPCLTE+QYKEME+KVS 
Sbjct: 78  KTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSS 137

Query: 569 TLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGXRFLQXXNACRFWXTGRGIYHNE 748
           TLS LEGELKGTFYPLTGMSKETQQ+LIDDHFLFKEG RFLQ  NA RFW TGRGIYHN+
Sbjct: 138 TLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANAXRFWPTGRGIYHND 197

Query: 749 NKT 757
           +KT
Sbjct: 198 DKT 200


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 26.2 bits (55), Expect = 0.41
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
 Frame = -3

Query: 505 PLERAAAAHAGGDHELAGGVEVAER---VHVSPVLGRVLVGLLEAIVVVLDDRVKQLGEH 335
           P+++ A     GD  L G + V ER   +   PV+ +  V  LEA++  LD    Q    
Sbjct: 106 PVKKEAVVE--GDLVLGGLMMVHERQDRLTCGPVMPQGGVQALEAMLYTLDKLNTQDIVP 163

Query: 334 GVRLGVRRV-DTDAGVQVLDTRLDTVK 257
           GVR+G   + D D     L+  +D +K
Sbjct: 164 GVRIGAHILDDCDNDTYGLEMSVDFIK 190


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 505 VPLQPLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDP 639
           VP   L +R+ V  DG +  ++  QP G  +  +LP  +  EG P
Sbjct: 570 VPSDVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKK-EGMP 613


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 505 VPLQPLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDP 639
           VP   L +R+ V  DG +  ++  QP G  +  +LP  +  EG P
Sbjct: 570 VPSDVLYNRLVVSEDGSETFKYSSQPYGFPERLLLPKGKK-EGMP 613


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 92  GTLNNRQEPTARCKNQNLK 36
           GT+ + ++ TA  K QNLK
Sbjct: 95  GTIKDLEDLTAEAKKQNLK 113


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 273 RVSRTWTPASVSTRRTPSRTP 335
           +V   W P  +  RRTP  TP
Sbjct: 352 QVFLNWMPRLLMMRRTPYSTP 372


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 208 SIRQPEEQEDLIRIHPP 258
           S  QP+EQE L  + PP
Sbjct: 34  SAEQPKEQEPLPPVTPP 50


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 794 CGGGPPSCTTRG 759
           CGGGP   TT G
Sbjct: 370 CGGGPTILTTPG 381


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,911
Number of Sequences: 438
Number of extensions: 4147
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)