Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_B12
(935 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 32 0.022
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 31 0.050
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 29 0.27
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 25 3.3
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 32.3 bits (70), Expect = 0.022
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -3
Query: 930 PRGXPXXGGXXXPPPPPXGGGXGXSPXXXGGGXXGGXXXGXPP 802
P G P PP PP G P GG GG PP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612
Score = 32.3 bits (70), Expect = 0.022
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -1
Query: 896 PPPPPPGGGXXXXPPXXXGGXXXGGPXXGXPRGXPP-XXFFGXGGGXPP 753
PPPPPP G PP GGP G PP G GG PP
Sbjct: 585 PPPPPPMG-----PPP---SPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625
Score = 30.3 bits (65), Expect = 0.088
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 911 GGXXXPPPPPPGGGXXXXPP 852
G PPPPPPGG PP
Sbjct: 526 GPLGPPPPPPPGGAVLNIPP 545
Score = 27.5 bits (58), Expect = 0.62
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Frame = +2
Query: 794 GXPGGXPXXXPPXXPPPXXXGXXPXP---PPXGGGGGXXXP 907
G P PP PPP G P P P GG G P
Sbjct: 572 GFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612
Score = 26.2 bits (55), Expect = 1.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 924 GXPXXGGXXXPPPPPXGGG 868
G GG PPPPP GG
Sbjct: 520 GRDLTGGPLGPPPPPPPGG 538
Score = 26.2 bits (55), Expect = 1.4
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +3
Query: 768 PXPKKXXXGXP--PGXXPPGXPPVXPPXXXXGXXXXPPPXGGGGGXXXPPXGXXP 926
P + G P P PP PP PP PPP GG P G P
Sbjct: 564 PAQLRFPAGFPNLPNAQPPPAPPPPPP-------MGPPPSPLAGGPLGGPAGSRP 611
Score = 25.4 bits (53), Expect = 2.5
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 769 PXPKKXXGGXPRGXPXXGPPXXXPPXXXGGXXXXPPPGGGGGGXXXPPXGXXP 927
P + G P P PP PP G PPP GG P G P
Sbjct: 564 PAQLRFPAGFPN-LPNAQPPPAPPPPPPMG----PPPSPLAGGPLGGPAGSRP 611
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 31.1 bits (67), Expect = 0.050
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = -1
Query: 926 GXXPXGGXXXPPPPPP-GGGXXXXPPXXXGGXXXGGPXXGXPRGXPPXXFFGXGGGXPP 753
G P G P PP P GG PP P PP GGG PP
Sbjct: 288 GGMPSGMVGPPRPPMPMQGGAPGGPPQGMRPNFYNRPMGDPQTSRPPSGNDNMGGGPPP 346
Score = 30.3 bits (65), Expect = 0.088
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Frame = +2
Query: 758 GXPPXPQKXXXGGX---PGGXPXXXPPXXPPPXXXGXXP-XPPPXGGGGGXXXPPXXGXP 925
G P PQ GG P G P P PP G P P G PP G P
Sbjct: 204 GTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQP 263
Score = 29.9 bits (64), Expect = 0.12
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 740 PXXGGGGXPPXPQKXXXGGXPGGXPXXXPPXXPPPXXXGXXPXPP 874
P G PP PQ G G P PP G P PP
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPP 222
Score = 29.5 bits (63), Expect = 0.15
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Frame = +2
Query: 764 PPXPQKXXXGGXPGGXP-XXXPPXXPPPXXXGXXPXPPPXGGGGGXXXPPXXGXP 925
PP P GG PGG P P P PP G PP P
Sbjct: 297 PPRPPMPMQGGAPGGPPQGMRPNFYNRPMGDPQTSRPPSGNDNMGGGPPPSSATP 351
Score = 26.2 bits (55), Expect = 1.4
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 794 GXPGGXPXXXPPXXPPPXXXGXXPXPPPXGGGGGXXXPPXXGXP 925
G P G PP P G P P GG PP P
Sbjct: 184 GMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMP 227
Score = 25.0 bits (52), Expect = 3.3
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +1
Query: 766 PPXPKKXXGGXPRGXPXXGPPXXXPPXXXGGXXXXPP 876
PP P+ G P G P P GG PP
Sbjct: 186 PPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPP 222
Score = 23.8 bits (49), Expect = 7.6
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Frame = -1
Query: 932 PPGXX--PXGGXXXPPPPPPGGGXXXXPP 852
PPG P G P PP GG PP
Sbjct: 194 PPGNVGPPRTGTPTQPQPPRPGGMYPQPP 222
Score = 23.8 bits (49), Expect = 7.6
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = +2
Query: 764 PPXPQKXXXGGXPGGXPXXXPPXXPPPXXXGXXPXPPPXGGGGGXXXPPXXGXPR 928
P P PG P P P P PP G P G PR
Sbjct: 222 PGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPR 276
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 28.7 bits (61), Expect = 0.27
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 841 PXXXGGXXXXPPPGGGGGGXXXPPXGXXPGG 933
P GG PGGGGG P G GG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230
Score = 26.6 bits (56), Expect = 1.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 909 GGXXXPPPPPXGGGXGXSPXXXGGGXXGG 823
GG P GGG P GGG GG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232
Score = 25.4 bits (53), Expect = 2.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 840 PXXXXGXXXXPPPXGGGGGXXXPPXGXXPGGG 935
P G P GGGG P G GGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGG 231
Score = 25.4 bits (53), Expect = 2.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 888 PPPXGGGXGXSPXXXGGGXXGGXXXGXPPG 799
P GGG G GGG GG G G
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229
Score = 25.0 bits (52), Expect = 3.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -3
Query: 918 PXXGGXXXPPPPPXGGGXGXSPXXXGGGXXGG 823
P GG P GGG GGG GG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGG 231
Score = 24.2 bits (50), Expect = 5.8
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 290 GXGXTAXXXPPPPXNRXEKRXTPPPXAP 373
G G A PPPP +R E+ AP
Sbjct: 909 GPGAAAATGPPPPTHRLEQPPQVVAAAP 936
Score = 23.8 bits (49), Expect = 7.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 924 GXPXXGGXXXPPPPPXGGGXG 862
G P GG P P GGG G
Sbjct: 210 GAPGGGGGSSGGPGPGGGGGG 230
Score = 23.8 bits (49), Expect = 7.6
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Frame = +1
Query: 841 PXXXGGXXXXPPPG-GGGGG 897
P GG P PG GGGGG
Sbjct: 212 PGGGGGSSGGPGPGGGGGGG 231
Score = 23.8 bits (49), Expect = 7.6
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 388 PXPGGGGGG 414
P PGGGGGG
Sbjct: 222 PGPGGGGGG 230
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 25.0 bits (52), Expect = 3.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 870 GXGXSPXXXGGGXXGGXXXGXPPG 799
G SP GGG GG G P G
Sbjct: 5 GWPASPLRAGGGGGGGGGGGGPSG 28
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.312 0.152 0.519
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,360
Number of Sequences: 2352
Number of extensions: 15345
Number of successful extensions: 117
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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