Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_B09
         (937 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4DAM6 Cluster: Putative uncharacterized protein; n=2; ...    38   0.48 
UniRef50_A3H7D7 Cluster: FAD dependent oxidoreductase; n=4; Ther...    35   2.6  
UniRef50_Q54IV2 Cluster: Putative uncharacterized protein; n=1; ...    34   4.5  
UniRef50_Q4U986 Cluster: HesB-family member protein, putative; n...    33   7.9  
UniRef50_A0E8F1 Cluster: Chromosome undetermined scaffold_82, wh...    33   7.9  

>UniRef50_Q4DAM6 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 747

 Score = 37.5 bits (83), Expect = 0.48
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +1

Query: 283 RGKPTKIKKIREFKTPFTNRHGSSLVEPISVRKIENLRNMGQQTSRK 423
           RG+P   K++ + KTP   R G S   PI +  +++ R+MG++ +R+
Sbjct: 364 RGEPNGGKQVDKVKTPTPGRGGRSTSPPIIILTVDSRRSMGEEDARR 410


>UniRef50_A3H7D7 Cluster: FAD dependent oxidoreductase; n=4;
           Thermoproteaceae|Rep: FAD dependent oxidoreductase -
           Caldivirga maquilingensis IC-167
          Length = 351

 Score = 35.1 bits (77), Expect = 2.6
 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
 Frame = +2

Query: 170 LFNKYFTKS*RRGKCTID---KFKVP*LILHTNFLYIN--ILREENLQKLRKYANLKLLS 334
           LF  YF KS       I    K+ +  L+L  +  Y++  +L  E+L+  R++   K ++
Sbjct: 13  LFTAYFLKSMGSDVVVIGEEPKYPLASLVLTQSMPYVDDILLARESLEVYRRFTKPKPVT 72

Query: 335 RIDMVVRWLNLS 370
            ID++ RW+NL+
Sbjct: 73  SIDIMPRWINLN 84


>UniRef50_Q54IV2 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1246

 Score = 34.3 bits (75), Expect = 4.5
 Identities = 20/68 (29%), Positives = 36/68 (52%)
 Frame = +2

Query: 155 IDTELLFNKYFTKS*RRGKCTIDKFKVP*LILHTNFLYINILREENLQKLRKYANLKLLS 334
           I+  + F + F+   +R K  +DK  +   I +T F Y+N    E  +K++K  N+K+L 
Sbjct: 416 INNFIKFLELFSNEYKRKKWQLDKVALN-FIRNTIFKYVN--NNEQYEKIKKSINIKMLD 472

Query: 335 RIDMVVRW 358
            I + + W
Sbjct: 473 IIQLPLEW 480


>UniRef50_Q4U986 Cluster: HesB-family member protein, putative; n=3;
           Theileria|Rep: HesB-family member protein, putative -
           Theileria annulata
          Length = 335

 Score = 33.5 bits (73), Expect = 7.9
 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
 Frame = -2

Query: 327 SFKFAYFLNFCRFSSRRMFIYKKFVCKISH-GTLN-LSIVHFPLRYDFVKYLLKSNSVS 157
           SF F YF++ C F+  +  +Y  F+  +S   T N L+ + F    +++K+ + SN+++
Sbjct: 121 SFNFNYFISKCEFTHLKQQLYNNFIITLSRILTYNILNNLSFRFSINYLKFNIHSNNLN 179


>UniRef50_A0E8F1 Cluster: Chromosome undetermined scaffold_82, whole
           genome shotgun sequence; n=8; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_82,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 2094

 Score = 33.5 bits (73), Expect = 7.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 486 QCPEICERCNRQMECKGVRLQKEKMATTCLRLHC 587
           +CP+ICE C   +EC   R   +   T+C+ L C
Sbjct: 648 ECPQICETCLNDIECLSCRYPYQIFVTSCV-LQC 680


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,253,066
Number of Sequences: 1657284
Number of extensions: 13289519
Number of successful extensions: 35965
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 34461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35957
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 85732778670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)