Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_B09
         (937 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681...    29   5.3  
08_02_1315 + 26083856-26083945,26084093-26084226,26084753-260848...    29   7.0  

>10_06_0131 -
           11066033-11066251,11066548-11067012,11067102-11068177,
           11068269-11068422,11068511-11068601,11069016-11069152
          Length = 713

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 371 LIGSTSELPCLFVKGVLNSRIFLI 300
           L+GS  E+ C FV G L SR FL+
Sbjct: 88  LLGSEFEVACSFVDGYLMSRTFLV 111


>08_02_1315 +
           26083856-26083945,26084093-26084226,26084753-26084819,
           26085011-26085192,26085315-26085444
          Length = 200

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 300 FCRFSSRRMFIYKKFVCKISHGTLNLSI 217
           F  + S R  I  KFVCK+ +G L  SI
Sbjct: 65  FANYYSLRFTIISKFVCKVCYGLLCTSI 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,465,267
Number of Sequences: 37544
Number of extensions: 357036
Number of successful extensions: 886
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)