Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_B09
         (937 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132859-6|CAB60493.3|  324|Caenorhabditis elegans Hypothetical ...    32   0.68 
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr...    31   1.6  
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu...    31   1.6  
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra...    31   1.6  
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.      31   1.6  

>AL132859-6|CAB60493.3|  324|Caenorhabditis elegans Hypothetical
           protein Y39C12A.7 protein.
          Length = 324

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 27  IGNSLRFDTLFIHFIRNCVSTSFTCYFFMKIVKFLSKIVKVTL*ILNYSL 176
           IG ++ F    I  I   V T F+  F+  +V F+S I+   + I+NY L
Sbjct: 117 IGYTMSFLIYLISIISVLVCTQFSTTFYPFLVLFMSNIISYIVNIINYKL 166


>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
            ZC101.2f protein.
          Length = 2389

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 692  AGRFQCNDYASNSLLRSLAPNVRTAAN 612
            AG ++CN Y +N ++ S A +V ++AN
Sbjct: 2049 AGEYRCNGYRNNEIIASAAVHVHSSAN 2075


>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
            ZC101.2e protein.
          Length = 3375

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 692  AGRFQCNDYASNSLLRSLAPNVRTAAN 612
            AG ++CN Y +N ++ S A +V ++AN
Sbjct: 2142 AGEYRCNGYRNNEIIASAAVHVHSSAN 2168


>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
            ZC101.2c protein.
          Length = 2295

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 692  AGRFQCNDYASNSLLRSLAPNVRTAAN 612
            AG ++CN Y +N ++ S A +V ++AN
Sbjct: 1955 AGEYRCNGYRNNEIIASAAVHVHSSAN 1981


>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
            ZC101.2a protein.
          Length = 2482

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 692  AGRFQCNDYASNSLLRSLAPNVRTAAN 612
            AG ++CN Y +N ++ S A +V ++AN
Sbjct: 2142 AGEYRCNGYRNNEIIASAAVHVHSSAN 2168


>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
            ZC101.2f protein.
          Length = 2389

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 692  AGRFQCNDYASNSLLRSLAPNVRTAAN 612
            AG ++CN Y +N ++ S A +V ++AN
Sbjct: 2049 AGEYRCNGYRNNEIIASAAVHVHSSAN 2075


>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
            ZC101.2e protein.
          Length = 3375

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 692  AGRFQCNDYASNSLLRSLAPNVRTAAN 612
            AG ++CN Y +N ++ S A +V ++AN
Sbjct: 2142 AGEYRCNGYRNNEIIASAAVHVHSSAN 2168


>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
            ZC101.2c protein.
          Length = 2295

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 692  AGRFQCNDYASNSLLRSLAPNVRTAAN 612
            AG ++CN Y +N ++ S A +V ++AN
Sbjct: 1955 AGEYRCNGYRNNEIIASAAVHVHSSAN 1981


>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
            ZC101.2a protein.
          Length = 2482

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 692  AGRFQCNDYASNSLLRSLAPNVRTAAN 612
            AG ++CN Y +N ++ S A +V ++AN
Sbjct: 2142 AGEYRCNGYRNNEIIASAAVHVHSSAN 2168


>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
           guidance protein 2,isoform a protein.
          Length = 2886

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -2

Query: 537 LPCTPSVCYSAHISLDTGG*FSIASSFPSSTTTGAFSTFPGSLLSHVP 394
           +P +P  C+S+H++ ++     I+ SFP +T T A S    S   H P
Sbjct: 697 IPTSPPSCHSSHVTSNSTHSTHISVSFP-NTVTSASSILSNSSSPHQP 743


>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
            proteoglycan protein.
          Length = 2481

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 692  AGRFQCNDYASNSLLRSLAPNVRTAAN 612
            AG ++CN Y +N ++ S A +V ++AN
Sbjct: 2141 AGEYRCNGYRNNEIIASAAVHVHSSAN 2167


>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
          Length = 2914

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -2

Query: 537 LPCTPSVCYSAHISLDTGG*FSIASSFPSSTTTGAFSTFPGSLLSHVP 394
           +P +P  C+S+H++ ++     I+ SFP +T T A S    S   H P
Sbjct: 697 IPTSPPSCHSSHVTSNSTHSTHISVSFP-NTVTSASSILSNSSSPHQP 743


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,708,658
Number of Sequences: 27780
Number of extensions: 339546
Number of successful extensions: 978
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)