Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_B07
         (1023 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000EB0F95 Cluster: UPI0000EB0F95 related cluster; n...    35   3.9  

>UniRef50_UPI0000EB0F95 Cluster: UPI0000EB0F95 related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB0F95 UniRef100
           entry - Canis familiaris
          Length = 273

 Score = 34.7 bits (76), Expect = 3.9
 Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
 Frame = +2

Query: 560 PXXPCPXSXPA-TXVXXXXIXLSXXGAPQPLXTXRSAPAXXVPXPXXXXPXPSXLXPTXX 736
           P  P   S PA T      +  +  GAP P       P    P P    P P    P   
Sbjct: 73  PEGPASPSSPARTSTDGRALRSAPQGAPPPAQAPTQGPEGLSPAPRAPKPLPPAPAPLPA 132

Query: 737 PPXXXPRCANLPXXXXP 787
           P    P C   P    P
Sbjct: 133 PRARSPGCPGAPPRTAP 149


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,941,549
Number of Sequences: 1657284
Number of extensions: 2667835
Number of successful extensions: 6484
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5859
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 97572067153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)