Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_B05
         (957 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   2.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   2.0  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   3.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   8.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   8.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   8.1  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = -1

Query: 297 VYIITNSSSQFPIQVRVFSLIRSSHAFS--C---FHILNTL 190
           VY++  SS+     +  F LI  +H FS  C   +HI NT+
Sbjct: 124 VYLVYCSSALVLAAMTTFHLIYEAHGFSYKCGIQYHICNTV 164


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = -1

Query: 297 VYIITNSSSQFPIQVRVFSLIRSSHAFS--C---FHILNTL 190
           VY++  SS+     +  F LI  +H FS  C   +HI NT+
Sbjct: 120 VYLVYCSSALVLAAMTTFHLIYEAHGFSYKCGIQYHICNTV 160


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -3

Query: 430 GDMRSPNGCTCRTSSQSPVPA--PIAALQGLAAV 335
           G + SP+G T   SS SP P   P++  + L ++
Sbjct: 55  GSLLSPSGNTPNKSSTSPYPPNHPLSGSKHLCSI 88


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 367 PIAALQGLAAVLPSLRFN*VMFNGIYYN*FKFTISDTSPGILL 239
           P+ +LQ + A + SLR    +FN I+   F   I+ TS  I++
Sbjct: 174 PMVSLQVIKAQIYSLRETVDVFNDIFGWPFLLLITFTSLQIMV 216


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 367 PIAALQGLAAVLPSLRFN*VMFNGIYYN*FKFTISDTSPGILL 239
           P+ +LQ + A + SLR    +FN I+   F   I+ TS  I++
Sbjct: 174 PMVSLQVIKAQIYSLRETVDVFNDIFGWPFLLLITFTSLQIMV 216


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 367 PIAALQGLAAVLPSLRFN*VMFNGIYYN*FKFTISDTSPGILL 239
           P+ +LQ + A + SLR    +FN I+   F   I+ TS  I++
Sbjct: 494 PMVSLQVIKAQIYSLRETVDVFNDIFGWPFLLLITFTSLQIMV 536


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,811
Number of Sequences: 336
Number of extensions: 3036
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26996013
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)