Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_B04
         (902 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    29   0.066
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.087
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    28   0.087

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 0.066
 Identities = 12/57 (21%), Positives = 27/57 (47%)
 Frame = -1

Query: 788 FIITSFIHILHETHYGILWIFLVSFGRFQAVITLVFKFFFNFSHMRPCCVWIRFCQG 618
           F+  +  ++L   + G +W  ++ FG F+  +    + +F F +    CV +   +G
Sbjct: 115 FLAPNLTYLLVALYSGYVWTDILGFGYFREYLAEAVQLYFQFYYTYFLCVIVCIFRG 171


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.087
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
 Frame = -1

Query: 839 FFTL-LSFIPSLGDHSLHFIITSFIHILHETHYGIL---WIFLVSFGRFQA-VITLVFKF 675
           +FTL L F+P +      FII + IH+L      IL   + F  +F  F   ++ LV  +
Sbjct: 201 YFTLHLLFLPCIYYFYSAFIIFT-IHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIY 259

Query: 674 FFNFSHMRPCCVWIRF 627
           +F + H+  CC +I F
Sbjct: 260 YFYYMHLLFCCAFIIF 275


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 0.087
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = -1

Query: 794 LHFIITSFIHILHETHYGILWIFLVSFGRFQAVITLVFKFFFNF 663
           L F++T+ I +L  T+   +W  ++    ++      F+F+  F
Sbjct: 112 LPFVVTNIIFVLFHTYEAFVWTRIMGVAYYEQYAVEFFQFYAQF 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,602
Number of Sequences: 336
Number of extensions: 4585
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)