Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_B04
(902 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061170-1|AAL28718.1| 230|Drosophila melanogaster LD13807p pro... 93 4e-19
AE014298-915|AAF46178.1| 230|Drosophila melanogaster CG3226-PA ... 93 4e-19
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai... 30 5.0
M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chai... 30 5.0
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 30 5.0
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P... 30 5.0
AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein... 29 8.7
>AY061170-1|AAL28718.1| 230|Drosophila melanogaster LD13807p
protein.
Length = 230
Score = 93.5 bits (222), Expect = 4e-19
Identities = 56/158 (35%), Positives = 84/158 (53%)
Frame = +2
Query: 170 IQEIRSDIEEFNDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEVSPIPTTST 349
+++++SD+ E L+QAK +V+D+L+ + T S+
Sbjct: 3 LEQLKSDVAELAAFLQQAKGARVKDVLTTA---KAEAEREIVNLELKAKIAAERQATGSS 59
Query: 350 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 529
A K+Y +L YGWDQS KFVK+F+ L V +E V T S++LHV +L+ K
Sbjct: 60 EA---KRYLHELTDYGWDQSAKFVKLFITLNGVQGCTEENVTVTYTPNSLQLHVRDLQGK 116
Query: 530 DYLLVINKLLEPINVADSHWKQKTDKVVIFLGKI*SKH 643
D+ L +N LL I+V S+ K KTD V I+L K+ KH
Sbjct: 117 DFGLTVNNLLHSIDVEKSYRKIKTDMVAIYLQKVEDKH 154
Score = 55.6 bits (128), Expect = 9e-08
Identities = 23/65 (35%), Positives = 42/65 (64%)
Frame = +3
Query: 648 WSHMTEIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQ 827
W +T I+K+ + ++++ L D +P+ +++++MK MY GD + K+MI+KAW E Q
Sbjct: 155 WDVLTAIQKRLKQKKDSELSK---DGDNPESALVNIMKKMYNDGDSKTKQMIAKAWTESQ 211
Query: 828 QRKKL 842
+ KL
Sbjct: 212 DKAKL 216
>AE014298-915|AAF46178.1| 230|Drosophila melanogaster CG3226-PA
protein.
Length = 230
Score = 93.5 bits (222), Expect = 4e-19
Identities = 56/158 (35%), Positives = 84/158 (53%)
Frame = +2
Query: 170 IQEIRSDIEEFNDLLKQAKRKKVQDLLSLEIRXXXXXXXXXXXXXXXXPMEVSPIPTTST 349
+++++SD+ E L+QAK +V+D+L+ + T S+
Sbjct: 3 LEQLKSDVAELAAFLQQAKGARVKDVLTTA---KAEAEREIVNLELKAKIAAERQATGSS 59
Query: 350 SAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENK 529
A K+Y +L YGWDQS KFVK+F+ L V +E V T S++LHV +L+ K
Sbjct: 60 EA---KRYLHELTDYGWDQSAKFVKLFITLNGVQGCTEENVTVTYTPNSLQLHVRDLQGK 116
Query: 530 DYLLVINKLLEPINVADSHWKQKTDKVVIFLGKI*SKH 643
D+ L +N LL I+V S+ K KTD V I+L K+ KH
Sbjct: 117 DFGLTVNNLLHSIDVEKSYRKIKTDMVAIYLQKVEDKH 154
Score = 55.6 bits (128), Expect = 9e-08
Identities = 23/65 (35%), Positives = 42/65 (64%)
Frame = +3
Query: 648 WSHMTEIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNMYETGDDEMKRMISKAWYEGQ 827
W +T I+K+ + ++++ L D +P+ +++++MK MY GD + K+MI+KAW E Q
Sbjct: 155 WDVLTAIQKRLKQKKDSELSK---DGDNPESALVNIMKKMYNDGDSKTKQMIAKAWTESQ 211
Query: 828 QRKKL 842
+ KL
Sbjct: 212 DKAKL 216
>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
protein.
Length = 3712
Score = 29.9 bits (64), Expect = 5.0
Identities = 25/80 (31%), Positives = 36/80 (45%)
Frame = +1
Query: 91 NVLICDFKRFAQHTNKLFIYQNVRSKNTRDKKRYRRVQ*SVKAS*T*ESTGFTLLGDQKT 270
N L D F+ H LF + + D +R R V + KA +++ F + +QK
Sbjct: 2305 NALKNDIGEFSDHLEDLFNWSEASQAKSADVER-RNVA-NQKAF---DNSKFDTVSEQKL 2359
Query: 271 *DRTNNIKRKGNFDANGSIT 330
NIK GNF NG +T
Sbjct: 2360 -QAEKNIKDAGNFLINGDLT 2378
>M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chain
protein.
Length = 1951
Score = 29.9 bits (64), Expect = 5.0
Identities = 25/80 (31%), Positives = 36/80 (45%)
Frame = +1
Query: 91 NVLICDFKRFAQHTNKLFIYQNVRSKNTRDKKRYRRVQ*SVKAS*T*ESTGFTLLGDQKT 270
N L D F+ H LF + + D +R R V + KA +++ F + +QK
Sbjct: 544 NALKNDIGEFSDHLEDLFNWSEASQAKSADVER-RNVA-NQKAF---DNSKFDTVSEQKL 598
Query: 271 *DRTNNIKRKGNFDANGSIT 330
NIK GNF NG +T
Sbjct: 599 -QAEKNIKDAGNFLINGDLT 617
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
Length = 3712
Score = 29.9 bits (64), Expect = 5.0
Identities = 25/80 (31%), Positives = 36/80 (45%)
Frame = +1
Query: 91 NVLICDFKRFAQHTNKLFIYQNVRSKNTRDKKRYRRVQ*SVKAS*T*ESTGFTLLGDQKT 270
N L D F+ H LF + + D +R R V + KA +++ F + +QK
Sbjct: 2305 NALKNDIGEFSDHLEDLFNWSEASQAKSADVER-RNVA-NQKAF---DNSKFDTVSEQKL 2359
Query: 271 *DRTNNIKRKGNFDANGSIT 330
NIK GNF NG +T
Sbjct: 2360 -QAEKNIKDAGNFLINGDLT 2378
>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
protein.
Length = 3712
Score = 29.9 bits (64), Expect = 5.0
Identities = 25/80 (31%), Positives = 36/80 (45%)
Frame = +1
Query: 91 NVLICDFKRFAQHTNKLFIYQNVRSKNTRDKKRYRRVQ*SVKAS*T*ESTGFTLLGDQKT 270
N L D F+ H LF + + D +R R V + KA +++ F + +QK
Sbjct: 2305 NALKNDIGEFSDHLEDLFNWSEASQAKSADVER-RNVA-NQKAF---DNSKFDTVSEQKL 2359
Query: 271 *DRTNNIKRKGNFDANGSIT 330
NIK GNF NG +T
Sbjct: 2360 -QAEKNIKDAGNFLINGDLT 2378
>AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein
protein.
Length = 2797
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/53 (28%), Positives = 32/53 (60%)
Frame = +2
Query: 101 FVISKDLHSIQTNCSFIKMSEAKIQEIRSDIEEFNDLLKQAKRKKVQDLLSLE 259
F ++K++ ++ N + + EAK Q+ SD++E +LL+Q + + + +LE
Sbjct: 1807 FEVNKEVLPLKAN---LAVQEAKYQKASSDLQEAEELLQQKENELAEVQQTLE 1856
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,953,188
Number of Sequences: 53049
Number of extensions: 704872
Number of successful extensions: 2500
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2499
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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