Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_B02
         (903 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   2.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   9.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.6  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +1

Query: 586 HQHHHFWT*ANFHH*QQEARVTKHPLQHP 672
           HQHHH     +  H QQ      HP  HP
Sbjct: 119 HQHHHQHP--HLPHVQQHHPSVHHPAHHP 145


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 409 GAPPGIAVELRPGDKAPPKVG 347
           G PPG  +   PG+  PP+ G
Sbjct: 184 GMPPGPQMMRPPGNVGPPRTG 204


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 141 DFLXVILNKDEEEMKKRSSTRHSSQTHED 227
           +FL  IL  DE++  +R + +H     +D
Sbjct: 231 EFLKSILRLDEDQCARRMAMKHIQANKDD 259


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +1

Query: 355  LGAPCRLAVIQLQCQAELPHQWHLELRCLVNELLQTEGLQCQQL 486
            + A  R A +  +   ++ HQW   L   +NE++  + L  +Q+
Sbjct: 1158 MAAGTRRAHVLQRSAGKMFHQWGEALGARLNEMVNNDKLTSEQM 1201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,681
Number of Sequences: 2352
Number of extensions: 13424
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)