Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_B01
(895 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 241 7e-65
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 152 6e-38
SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces ... 151 1e-37
SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces pomb... 84 3e-17
SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces ... 66 6e-12
SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 60 3e-10
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 51 2e-07
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 32 0.096
SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase |Schizos... 28 2.1
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 27 3.6
SPBC354.12 |gpd3||glyceraldehyde 3-phosphate dehydrogenase Gpd3|... 27 3.6
SPAC637.11 |suv3||ATP-dependent RNA helicase Suv3|Schizosaccharo... 27 4.8
SPAC26H5.04 |||vacuolar import and degradation protein Vid28|Sch... 26 6.3
SPCC1020.03 |||mitochondrial iron ion transporter|Schizosaccharo... 26 6.3
SPAC7D4.06c |alg3||dolichol-P-Man dependent alpha|Schizosaccharo... 26 6.3
SPBC16E9.09c |||COPII vesicle coat component Erp5/Erp6|Schizosac... 26 8.3
SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom... 26 8.3
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 26 8.3
SPBC4F6.11c |||asparagine synthase |Schizosaccharomyces pombe|ch... 26 8.3
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 241 bits (591), Expect = 7e-65
Identities = 108/185 (58%), Positives = 145/185 (78%), Gaps = 1/185 (0%)
Frame = +3
Query: 189 NSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSKAQVA 368
++K+L+VGAGGIGCE+LKNL+++G + IIDLDTID+SNLNRQFLF K+HV + KA VA
Sbjct: 25 SAKVLLVGAGGIGCELLKNLLMSGVKEVHIIDLDTIDLSNLNRQFLFRKKHVKQPKAIVA 84
Query: 369 KDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAADVPL 548
+A SFNPNV + A+H ++ + + V +F+QF++V NALDN AR HVN+ CL A VPL
Sbjct: 85 AKTASSFNPNVKLEAYHANIKEDRFNVAWFRQFDLVFNALDNLDARRHVNKQCLLASVPL 144
Query: 549 IETGTAGYAGQVELIKKGLTQCYECQPKAPQKSFPGCTIRNTPSEPIHCIVWAK-HLFNQ 725
IE+GT G+ GQV++I G T+CY+C PK P K++P CTIR+TPS+PIHC+VWAK + F Q
Sbjct: 145 IESGTTGFLGQVQVIIHGKTECYDCNPKEPPKTYPVCTIRSTPSQPIHCVVWAKSYFFPQ 204
Query: 726 LFGEE 740
LF +
Sbjct: 205 LFSND 209
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 152 bits (369), Expect = 6e-38
Identities = 80/202 (39%), Positives = 120/202 (59%), Gaps = 10/202 (4%)
Frame = +3
Query: 156 VFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFP-----YIEIIDLDTIDVSNLNRQ 320
VF + E IA+ +VGAG IGCE+LKN + G +I + D+D+I+ SNLNRQ
Sbjct: 416 VFGSEFQEKIASLSTFLVGAGAIGCEMLKNWAMMGVATGESGHISVTDMDSIEKSNLNRQ 475
Query: 321 FLFHKEHVGKSKAQVAKDSALSFNPNVT--IVAHHDSVISNDYGV---KYFKQFNIVMNA 485
FLF VGK K++ A + NP++T I ++ + V G+ ++F++ ++V NA
Sbjct: 476 FLFRPRDVGKLKSECASTAVSIMNPSLTGKITSYQERVGPESEGIFGDEFFEKLSLVTNA 535
Query: 486 LDNRVARNHVNRLCLAADVPLIETGTAGYAGQVELIKKGLTQCYECQPKAPQKSFPGCTI 665
LDN AR +V+R C+ + PL+E+GT G G +++ LT+ Y P+KSFP CT+
Sbjct: 536 LDNVEARMYVDRRCVFFEKPLLESGTLGTKGNTQVVVPHLTESYGSSQDPPEKSFPICTL 595
Query: 666 RNTPSEPIHCIVWAKHLFNQLF 731
+N P+ H I WA+ LF LF
Sbjct: 596 KNFPNRIEHTIAWARDLFEGLF 617
Score = 48.8 bits (111), Expect = 1e-06
Identities = 31/150 (20%), Positives = 65/150 (43%)
Frame = +3
Query: 135 MVARVAGVFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLN 314
+ +R V + + ++ S +L++G G+G EI KN+ L G + + D + +L+
Sbjct: 19 LYSRQLYVLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLAGVKSVTLYDPQPTRIEDLS 78
Query: 315 RQFLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALDN 494
Q+ ++ +G +A+V N V + SV+ ++ +Y K F V+ +
Sbjct: 79 SQYFLTEDDIGVPRAKVTVSKLAELNQYVPV-----SVV-DELSTEYLKNFKCVVVTETS 132
Query: 495 RVARNHVNRLCLAADVPLIETGTAGYAGQV 584
+ +N + I + G G +
Sbjct: 133 LTKQLEINDFTHKNHIAYIAADSRGLFGSI 162
>SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 151 bits (366), Expect = 1e-37
Identities = 71/188 (37%), Positives = 117/188 (62%), Gaps = 7/188 (3%)
Frame = +3
Query: 165 EKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHV 344
E+ ++ +SK+L++GAGG+GCEILK+L L+GF + +ID+DTID++NLNRQFLF++ ++
Sbjct: 36 EETLKSAFSSKILIIGAGGLGCEILKDLALSGFRDLSVIDMDTIDITNLNRQFLFNESNI 95
Query: 345 GKSKAQVAKDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVNRL 524
+ KA VA + P+ + + + D ++++K+F +++ LD+ AR +N
Sbjct: 96 DEPKANVAASMIMKRIPSTVVTPFYGKI--QDKTIEFYKEFKLIICGLDSVEARRWINST 153
Query: 525 CLAAD-----VPLIETGTAGYAGQVELIKKGLTQCYEC--QPKAPQKSFPGCTIRNTPSE 683
+A +PL++ G+ G GQ +I +T CYEC P+ S+P CT+ NTP
Sbjct: 154 LVAIAKTGDLIPLVDGGSEGLKGQARVIIPTITSCYECSLDMLTPKISYPICTLANTPRL 213
Query: 684 PIHCIVWA 707
P HC+ WA
Sbjct: 214 PEHCVEWA 221
>SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 401
Score = 83.8 bits (198), Expect = 3e-17
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Frame = +3
Query: 180 AIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSKA 359
++ S +LV+GAGG+GC ++ LV G + I+D D +D SNL+RQ + G KA
Sbjct: 40 SLKRSSVLVIGAGGLGCPAMQYLVAAGIGTLGIMDGDVVDKSNLHRQIIHSTSKQGMHKA 99
Query: 360 QVAKDSALSFNPNVTIVAHHD-SVISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAA 536
AK NPNV I + + + SN + + +Q+++V++ DN+ R ++ C+
Sbjct: 100 ISAKQFLEDLNPNVIINTYLEFASASNLFSI--IEQYDVVLDCTDNQYTRYLISDTCVLL 157
Query: 537 DVPLIETGTAGYAGQVELIKKGLTQCYECQPKAPQKSFPGC 659
PL+ GQ+ + CY C P C
Sbjct: 158 GRPLVSASALKLEGQLCIYNYCNGPCYRCMFPNPTPVVASC 198
>SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 500
Score = 66.1 bits (154), Expect = 6e-12
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Frame = +3
Query: 180 AIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSKA 359
AI S + ++ A +GCE LKNL+L G ++D ++D S F + GKS+A
Sbjct: 24 AIEKSHVCLLYANTVGCEALKNLILPGIGSFAVVDDTSVDFSMDGMNFFIQYDQEGKSRA 83
Query: 360 QVAKDSALSFNPNVTI-VAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAA 536
+ NPNV + D ++YF +F++V+++ + +
Sbjct: 84 RCTASLLQQLNPNVEMEYLEMSPEALIDKNIEYFSKFSVVLSSNLKEKPLFRLEEYLRSH 143
Query: 537 DVPLIETGTAGYAGQVELIKKGLTQCYECQPKAPQ 641
+PL+ + G+AG + + T + QP+ PQ
Sbjct: 144 KIPLLHFNSVGFAGILRISTHEYTTT-QSQPELPQ 177
>SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 485
Score = 60.5 bits (140), Expect = 3e-10
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Frame = +3
Query: 132 KMVARVAGVFDEKLTEAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNL 311
+ +AR F E E + NS ++VVG GG+G ++ L +G I I+D D + +S+L
Sbjct: 107 EQLARNYAFFGEDGMERLRNSFVIVVGCGGVGSWVINMLARSGVQKIRIVDFDQVSLSSL 166
Query: 312 NRQFLFHKEHVGKSKAQVAKDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALD 491
NR + + VG K K + F P + + A + + + V++A+D
Sbjct: 167 NRHSIATLQDVGTPKTLAIKKAIKKFAPWIEVDARNALFNPDSADDLLSGNPDFVIDAID 226
Query: 492 NRVARNHVNRLCLAADVPLI-ETGTA 566
N + + C +P+I TG+A
Sbjct: 227 NIQTKVDLLSYCYNHKLPVIASTGSA 252
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 51.2 bits (117), Expect = 2e-07
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 177 EAIANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKS- 353
+ I NSK L++GAG +GC + +NL+ G ++ +D T+ SN RQ LF E +
Sbjct: 331 DRIQNSKCLLLGAGTLGCGVARNLLSWGVRHVTFVDYSTVSYSNPVRQSLFTFEDCKRKL 390
Query: 354 -KAQVAKDSALSFNPNVTIVAHHDSV 428
KA+ A PN+ ++ S+
Sbjct: 391 PKAECAAQRLKEIYPNMFSTGYNISI 416
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 32.3 bits (70), Expect = 0.096
Identities = 34/134 (25%), Positives = 56/134 (41%)
Frame = +3
Query: 186 ANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEHVGKSKAQV 365
A K+ +VG G G L L+ +P E I +D ++N++ +L K + K +
Sbjct: 1127 AREKVAIVGISGSGKSTLVELLRKTYPS-EDIYIDGYPLTNIDTNWLLKKVAIVDQKPHL 1185
Query: 366 AKDSALSFNPNVTIVAHHDSVISNDYGVKYFKQFNIVMNALDNRVARNHVNRLCLAADVP 545
+ L +S++ YGV + N VM+ALD + L D P
Sbjct: 1186 LGSTIL------------ESLL---YGVD--RDINSVMDALDKTYMTEVIQNLPNGLDTP 1228
Query: 546 LIETGTAGYAGQVE 587
L+E GQ++
Sbjct: 1229 LLEFSKNFSGGQIQ 1242
>SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 267 YIEIIDLDTIDVSNLNRQFLFHKEHVGKSKAQVAKD 374
Y I+ D NL R F KEHVGKS+ +D
Sbjct: 204 YDFIVKADDDSFLNLPRLFEMLKEHVGKSRFYFGRD 239
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 348 KSKAQVAKDSALSF-NPNVTIVAHHDSVISNDYGVKYFKQ 464
+++A V D L F NP T + +DSV S D+ ++Y Q
Sbjct: 608 RAQAMVDDDEFLEFANPEETKILKNDSVESYDWLIEYGSQ 647
>SPBC354.12 |gpd3||glyceraldehyde 3-phosphate dehydrogenase
Gpd3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 183 IANSKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSNLNRQFLFHKEH 341
+A K+ + G G IG +L+N +LTG + ++ ID+ + F + H
Sbjct: 1 MAIPKVGINGFGRIGRIVLRNAILTGKIQVVAVNDPFIDLDYMAYMFKYDSTH 53
>SPAC637.11 |suv3||ATP-dependent RNA helicase
Suv3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = -3
Query: 575 SISCCTCLYKRYISSKTQSINMVTGNTIVQCIHHNVELFEVFYTIVIADYTVMVSYDCYI 396
S T LY++ + +++N+ T N CI +LF + ++ D + +D Y
Sbjct: 448 SAGIVTTLYQKDFAKLNRAMNLPTKNLFNACIGAKDDLFFRYLSLFSDDIPQKLIFDRYF 507
Query: 395 RV 390
++
Sbjct: 508 KL 509
>SPAC26H5.04 |||vacuolar import and degradation protein
Vid28|Schizosaccharomyces pombe|chr 1|||Manual
Length = 729
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 587 LHLTSISCCTCLYKRYISSK--TQSINMVTGNTIVQCIHHNVELFEV 453
+ L SISC LYK I SK T+ I M+ +++ + E ++
Sbjct: 303 IRLLSISCLVTLYKAGILSKNQTKEIQMIVTPILIRLFFESREAKQI 349
>SPCC1020.03 |||mitochondrial iron ion
transporter|Schizosaccharomyces pombe|chr 3|||Manual
Length = 397
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -1
Query: 172 NFSSKTPATLATILIYTSTDRITKLCAKFVIVFNTNSTRIHKWK 41
+F+S+ + LA + T D I L + V +++S ++H+W+
Sbjct: 336 SFTSQQSSELAQKVEKTVLDAIPALSSCIVTPLSSDSNQVHRWQ 379
>SPAC7D4.06c |alg3||dolichol-P-Man dependent
alpha|Schizosaccharomyces pombe|chr 1|||Manual
Length = 406
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 103 SLFDLSKYKSKWSRGSLAFSMRN*QKLLQILNCW*WAPAALVV 231
SLF LS K KW R S+ S+ K+ +L + PA LV+
Sbjct: 162 SLFILSSCKKKWVRASILLSVACSVKMSSLL----YVPAYLVL 200
>SPBC16E9.09c |||COPII vesicle coat component
Erp5/Erp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 451 NTSNSSTL**MHWTIVLPVTMLIDCVLLLMYL 546
+TS S+ + WTIV V +L+ C+ L +L
Sbjct: 174 DTSESANSRVVRWTIVQIVVLLVTCIWQLSHL 205
>SPAC23D3.10c |eng2||endo-1,3-beta-glucanase
Eng2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 706
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 280 IISIYGKPVSTRFLRISQPMPPAPTTSNLEFAIASVNF 167
++ IY P++ F + P PP TSNL F I + F
Sbjct: 4 LVPIYTGPINPVFPSRAHPSPPLGLTSNL-FPIQTNKF 40
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 166 SSKTPATLATILIYTSTDRITKLCAKFVIVFNTNSTR 56
+ KT LAT++ Y TD+I ++ +IV N R
Sbjct: 1149 NKKTYPRLATVVGYVLTDKIMEVVKAILIVQRDNGDR 1185
>SPBC4F6.11c |||asparagine synthase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 548
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 192 SKLLVVGAGGIGCEILKNLVLTGFPYIEIIDLDTIDVSN 308
S++ V+ +GG+ C +L L+ P E IDL + N
Sbjct: 254 SRVCVLYSGGVDCGVLARLMHDIVPNNESIDLINVAFEN 292
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,354,401
Number of Sequences: 5004
Number of extensions: 66915
Number of successful extensions: 213
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -