Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_A19
         (890 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78016-4|CAC42335.1|  359|Caenorhabditis elegans Hypothetical pr...    48   9e-06
AF100662-2|AAC68976.1|  478|Caenorhabditis elegans Hypothetical ...    31   1.5  
AF047659-10|AAC04430.1|  798|Caenorhabditis elegans Hypothetical...    31   1.5  
Z83220-1|CAB05700.2|  440|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p...    28   7.8  
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p...    28   7.8  
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos...    28   7.8  
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z78016-4|CAC42335.1|  359|Caenorhabditis elegans Hypothetical
           protein R186.7 protein.
          Length = 359

 Score = 48.0 bits (109), Expect = 9e-06
 Identities = 25/88 (28%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +2

Query: 518 DDEQARTRNRRIFGSLL-GTLQKFKQEEIELQTKEDKKAQVERKIEEQAXXXXXXXXXXX 694
           +++ ++ RNRR+F +L+ GTL  FK+ E +  T+++K+ +VE+K+EE             
Sbjct: 152 ENKDSKQRNRRLFSNLIMGTLSSFKKTE-KKTTQQEKQEEVEKKLEETKKKDFESRKEEK 210

Query: 695 XVMFAEREQKKAXIKALEAKMGRVQEFE 778
             +  +R +++  +K+L+ K   +Q  E
Sbjct: 211 HDLLNKRREQEKELKSLQRKKALIQYAE 238


>AF100662-2|AAC68976.1|  478|Caenorhabditis elegans Hypothetical
           protein H34C03.1 protein.
          Length = 478

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -1

Query: 563 RNQKFF-YSVCVPVHHHPCALRIAALVGSSLH-TADDTRTL 447
           R Q FF  S+C+P H HP  LR   L  S++    ++T++L
Sbjct: 97  RRQIFFSISMCMPRHRHPSILRACRLTVSAIECLTEETKSL 137


>AF047659-10|AAC04430.1|  798|Caenorhabditis elegans Hypothetical
           protein K07H8.10 protein.
          Length = 798

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
 Frame = +1

Query: 238 GRFAND---RFNSGDYPR--GGNRIG---NRNSYTESGNNFKPDEQFGKRKQETKTVFSR 393
           GR  ND   R   G++    GG+R+G    R  Y   G++ + +E+  K+K  T T F++
Sbjct: 161 GRGGNDFSPRGGRGNFQSRGGGSRVGFSDKRKQYDSDGDDDE-EEEVPKKKLATGTPFAK 219

Query: 394 ISARADNSDGEDD 432
            +   ++  GED+
Sbjct: 220 QTKPVEDDSGEDE 232


>Z83220-1|CAB05700.2|  440|Caenorhabditis elegans Hypothetical
           protein C34B7.1 protein.
          Length = 440

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -3

Query: 612 VCNSISSCLNFCNVPSKEPKI----LLFRVRACSSSPL-CFKDCC 493
           +CN ++ C N+CN P + P I     L R   C SS   CF   C
Sbjct: 200 ICNDVNLCNNYCN-PGQTPPIPQRQPLVRCYDCESSDSDCFTGSC 243


>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
           protein M106.1 protein.
          Length = 1244

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = +2

Query: 578 QKFKQEEIELQTKEDKKAQVERKIEEQ 658
           +KF Q +++L+ KED+K ++E   ++Q
Sbjct: 266 EKFNQLDLDLKNKEDEKKKMEESRDDQ 292


>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
           protein M106.1 protein.
          Length = 1244

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = +2

Query: 578 QKFKQEEIELQTKEDKKAQVERKIEEQ 658
           +KF Q +++L+ KED+K ++E   ++Q
Sbjct: 266 EKFNQLDLDLKNKEDEKKKMEESRDDQ 292


>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
           and X-chromosomeassociated MIX-1 protein protein.
          Length = 1244

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = +2

Query: 578 QKFKQEEIELQTKEDKKAQVERKIEEQ 658
           +KF Q +++L+ KED+K ++E   ++Q
Sbjct: 266 EKFNQLDLDLKNKEDEKKKMEESRDDQ 292


>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
           protein M106.1 protein.
          Length = 1244

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = +2

Query: 578 QKFKQEEIELQTKEDKKAQVERKIEEQ 658
           +KF Q +++L+ KED+K ++E   ++Q
Sbjct: 266 EKFNQLDLDLKNKEDEKKKMEESRDDQ 292


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,380,999
Number of Sequences: 27780
Number of extensions: 301717
Number of successful extensions: 1161
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)