Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_A19
         (890 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    27   0.17 
AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    22   6.5  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    22   6.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   8.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   8.6  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 21/107 (19%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
 Frame = +1

Query: 130 GTEVAISFSSLRAQLENEKSNL----FK-LDENIKKIVQTT--GRFANDRFNSGDYPRGG 288
           G E  ++ S+   ++ N   N     F+ L  N+  +++ T  GR+ N   N+G+     
Sbjct: 377 GNEYMLALSNRMQKIINNDFNFNDVNFRILGANVDDLMRNTRCGRYHNQ--NAGNQNADN 434

Query: 289 NRIGNRNSYTESGNNFKPDEQFGKRKQETKTVFSRISARADNSDGED 429
               N+N+  ++ +N   ++Q G R+ + +   ++ +    N + ++
Sbjct: 435 QNADNQNANNQNADNQNANKQNGNRQNDNRQNDNKQNGNRQNDNKQN 481



 Score = 27.1 bits (57), Expect = 0.23
 Identities = 20/83 (24%), Positives = 39/83 (46%)
 Frame = +1

Query: 184 KSNLFKLDENIKKIVQTTGRFANDRFNSGDYPRGGNRIGNRNSYTESGNNFKPDEQFGKR 363
           K N  + ++N +   +  G   ND   +G+      + GNR    ++GN    ++Q G R
Sbjct: 454 KQNGNRQNDNRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNR----QNGNKQNDNKQNGNR 509

Query: 364 KQETKTVFSRISARADNSDGEDD 432
           + + K   +R   + DN + ++D
Sbjct: 510 QNDNKRNGNR---QNDNQNNQND 529



 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = +1

Query: 178 NEKSNLFKLDENIKKIVQTTGRFANDRFNSGDYPRGGNRIGNRNSYTESGNN 333
           + K N  + ++N +   +  G   ND   +G+      R GNR +  ++  N
Sbjct: 477 DNKQNGNRQNDNKQNGNRQNGNKQNDNKQNGNRQNDNKRNGNRQNDNQNNQN 528


>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 348 LIRFEVVTAFCIRISVSDTIATSRI 274
           ++   V+ AFC+ + VSD  A + I
Sbjct: 4   IVAVVVLAAFCVAMLVSDVSAKTSI 28


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 348 LIRFEVVTAFCIRISVSDTIATSRI 274
           ++   V+ AFC+ + VSD  A + I
Sbjct: 4   IVAVVVLAAFCVAMLVSDVSAKTSI 28


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 688 REKSNVCRKRTEESXNK 738
           +EKSNVC K  E+   K
Sbjct: 111 KEKSNVCLKFEEQKRRK 127


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 310 SYTESGNNFKPDEQFGKRKQETKTVFSRISARADNSDGEDDLPTNK 447
           S +   N+   D  F + K+E +T+  + S   DN +   +   NK
Sbjct: 145 SKSNGSNSSNSDVLFKQNKEEEQTINRKNSDYLDNQEVSMENTENK 190


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 628 STS*KENRRASKITKGKRI*REKSNVCRKRTE 723
           STS +E+R     T  +   REKS  C K  E
Sbjct: 757 STSSEESREEKATTSLEAEKREKSEHCEKGKE 788


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,924
Number of Sequences: 438
Number of extensions: 3775
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)