Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_A17
(879 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99975-1|CAA68236.1| 480|Homo sapiens hRTR/hGCNF protein protein. 36 0.15
U80802-1|AAB96828.1| 480|Homo sapiens orphan nuclear receptor G... 36 0.15
U64876-1|AAB06335.1| 480|Homo sapiens nuclear orphan receptor p... 36 0.15
S83309-1|AAB50876.1| 476|Homo sapiens germ cell nuclear factor ... 36 0.15
BC030600-1|AAH30600.1| 475|Homo sapiens nuclear receptor subfam... 36 0.15
AL354979-4|CAI10960.1| 479|Homo sapiens nuclear receptor subfam... 36 0.15
AL354928-2|CAI39633.1| 479|Homo sapiens nuclear receptor subfam... 36 0.15
AL158075-1|CAI13577.1| 479|Homo sapiens nuclear receptor subfam... 36 0.15
BC103941-1|AAI03942.1| 568|Homo sapiens CPEB2 protein protein. 34 0.59
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 33 1.0
BC105925-1|AAI05926.1| 562|Homo sapiens CPEB2 protein protein. 33 1.8
BC103940-1|AAI03941.1| 589|Homo sapiens cytoplasmic polyadenyla... 33 1.8
AY255519-1|AAP41553.1| 559|Homo sapiens cytoplasmic polyadenyla... 33 1.8
AY247744-1|AAP37585.1| 589|Homo sapiens cytoplasmic polyadenyla... 33 1.8
AL035425-2|CAB90290.1| 1257|Homo sapiens insulin receptor substr... 33 1.8
AF007567-1|AAC51738.1| 1257|Homo sapiens insulin receptor substr... 33 1.8
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 27 2.4
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 31 4.2
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 31 4.2
BX649186-1|CAE46204.1| 669|Homo sapiens hypothetical protein pr... 31 4.2
BC068504-1|AAH68504.1| 849|Homo sapiens diaphanous homolog 3 (D... 31 4.2
BC048963-1|AAH48963.1| 849|Homo sapiens diaphanous homolog 3 (D... 31 4.2
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 31 4.2
BC034952-1|AAH34952.1| 849|Homo sapiens diaphanous homolog 3 (D... 31 4.2
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 31 4.2
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 31 4.2
AY818645-1|AAW78862.1| 1112|Homo sapiens diaphanous-related form... 31 4.2
AY750055-1|AAW73254.1| 1152|Homo sapiens diaphanous homolog 3 pr... 31 4.2
AL390878-5|CAI14158.2| 1193|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL390878-4|CAM19740.1| 1123|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL390878-3|CAM19739.1| 1182|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL390878-2|CAM19741.1| 1147|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL390878-1|CAM19738.1| 1112|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL359266-4|CAM15405.1| 1193|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL359266-3|CAM15403.1| 1123|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL359266-2|CAM15406.1| 1182|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL359266-1|CAM15404.1| 1147|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL356502-5|CAI14102.2| 1193|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL356502-4|CAM19400.1| 1123|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL356502-3|CAM19399.1| 1182|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL356502-2|CAM19401.1| 1147|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL356502-1|CAM19398.1| 1112|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL354829-5|CAM14267.1| 1193|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL354829-4|CAM14265.1| 1123|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL354829-3|CAI39756.2| 1182|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL354829-2|CAM14266.1| 1147|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AL354829-1|CAI39757.2| 1112|Homo sapiens diaphanous homolog 3 (D... 31 4.2
AK092024-1|BAC03793.1| 699|Homo sapiens protein ( Homo sapiens ... 31 4.2
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 31 4.2
AB244758-1|BAE96352.1| 1123|Homo sapiens mammalian diaphanous ho... 31 4.2
AB244757-1|BAE96351.1| 1147|Homo sapiens mammalian diaphanous ho... 31 4.2
AB244756-1|BAE96350.1| 1182|Homo sapiens mammalian diaphanous ho... 31 4.2
U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron pro... 31 5.5
U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron pro... 31 5.5
U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known i... 31 5.5
U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy d... 31 5.5
BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuro... 31 5.5
BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuro... 31 5.5
BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuro... 31 5.5
BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein. 31 5.5
AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuro... 31 5.5
AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1... 31 5.5
X69438-1|CAA49214.1| 486|Homo sapiens zinc finger protein protein. 31 7.3
X60104-1|CAA42698.1| 486|Homo sapiens zinc finger protein protein. 31 7.3
AC010913-4|AAX88903.1| 486|Homo sapiens unknown protein. 31 7.3
BC131534-1|AAI31535.1| 1386|Homo sapiens DEAH (Asp-Glu-Ala-Asp/H... 25 8.5
BC060778-1|AAH60778.2| 658|Homo sapiens DHX57 protein protein. 25 9.0
D38305-1|BAA07423.1| 345|Homo sapiens Tob protein. 30 9.6
CR541686-1|CAG46487.1| 345|Homo sapiens TOB1 protein. 30 9.6
CR536487-1|CAG38726.1| 345|Homo sapiens TOB1 protein. 30 9.6
BT019381-1|AAV38188.1| 345|Homo sapiens transducer of ERBB2, 1 ... 30 9.6
BT019380-1|AAV38187.1| 345|Homo sapiens transducer of ERBB2, 1 ... 30 9.6
BC098415-1|AAH98415.1| 345|Homo sapiens transducer of ERBB2, 1 ... 30 9.6
BC070493-1|AAH70493.1| 345|Homo sapiens transducer of ERBB2, 1 ... 30 9.6
BC031406-1|AAH31406.1| 345|Homo sapiens transducer of ERBB2, 1 ... 30 9.6
AY950677-1|AAY34145.1| 520|Homo sapiens MEX3A protein. 30 9.6
AY524047-1|AAS94256.1| 345|Homo sapiens PIG49 protein. 30 9.6
>X99975-1|CAA68236.1| 480|Homo sapiens hRTR/hGCNF protein protein.
Length = 480
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 626 EKXXPXPXGGGGGGXXXFFXXXPPPPPPPP 537
E+ P P GGGGGG F P PPPP
Sbjct: 2 ERDEPPPSGGGGGGGSAGFLEPPAALPPPP 31
>U80802-1|AAB96828.1| 480|Homo sapiens orphan nuclear receptor GCNF
protein.
Length = 480
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 626 EKXXPXPXGGGGGGXXXFFXXXPPPPPPPP 537
E+ P P GGGGGG F P PPPP
Sbjct: 2 ERDEPPPSGGGGGGGSAGFLEPPAALPPPP 31
>U64876-1|AAB06335.1| 480|Homo sapiens nuclear orphan receptor
protein.
Length = 480
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 626 EKXXPXPXGGGGGGXXXFFXXXPPPPPPPP 537
E+ P P GGGGGG F P PPPP
Sbjct: 2 ERDEPPPSGGGGGGGSAGFLEPPAALPPPP 31
>S83309-1|AAB50876.1| 476|Homo sapiens germ cell nuclear factor
protein.
Length = 476
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 626 EKXXPXPXGGGGGGXXXFFXXXPPPPPPPP 537
E+ P P GGGGGG F P PPPP
Sbjct: 2 ERDEPPPSGGGGGGGSAGFLEPPAALPPPP 31
>BC030600-1|AAH30600.1| 475|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 475
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 626 EKXXPXPXGGGGGGXXXFFXXXPPPPPPPP 537
E+ P P GGGGGG F P PPPP
Sbjct: 2 ERDEPPPSGGGGGGGSAGFLEPPAALPPPP 31
>AL354979-4|CAI10960.1| 479|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 479
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 626 EKXXPXPXGGGGGGXXXFFXXXPPPPPPPP 537
E+ P P GGGGGG F P PPPP
Sbjct: 2 ERDEPPPSGGGGGGGSAGFLEPPAALPPPP 31
>AL354928-2|CAI39633.1| 479|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 479
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 626 EKXXPXPXGGGGGGXXXFFXXXPPPPPPPP 537
E+ P P GGGGGG F P PPPP
Sbjct: 2 ERDEPPPSGGGGGGGSAGFLEPPAALPPPP 31
>AL158075-1|CAI13577.1| 479|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 479
Score = 36.3 bits (80), Expect = 0.15
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 626 EKXXPXPXGGGGGGXXXFFXXXPPPPPPPP 537
E+ P P GGGGGG F P PPPP
Sbjct: 2 ERDEPPPSGGGGGGGSAGFLEPPAALPPPP 31
>BC103941-1|AAI03942.1| 568|Homo sapiens CPEB2 protein protein.
Length = 568
Score = 34.3 bits (75), Expect = 0.59
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P GGGGGG F PPPPPP
Sbjct: 42 PTSGGGGGGGFGGPFSATAVPPPPPP 67
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 596 GGGGXXXFFXXXPPPPPPPP 537
GGGG F+ PPP PPPP
Sbjct: 73 GGGGAGAFYPVPPPPLPPPP 92
>BC105925-1|AAI05926.1| 562|Homo sapiens CPEB2 protein protein.
Length = 562
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPPP 537
GGGGGG F PPPPPP
Sbjct: 45 GGGGGGFGGPFSATAVPPPPPP 66
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPP 540
P GGGGG F PPPPPP
Sbjct: 42 PTSGGGGGGFGGPFSATAVPPPPPP 66
>BC103940-1|AAI03941.1| 589|Homo sapiens cytoplasmic
polyadenylation element binding protein 2 protein.
Length = 589
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPPP 537
GGGGGG F PPPPPP
Sbjct: 45 GGGGGGFGGPFSATAVPPPPPP 66
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPP 540
P GGGGG F PPPPPP
Sbjct: 42 PTSGGGGGGFGGPFSATAVPPPPPP 66
>AY255519-1|AAP41553.1| 559|Homo sapiens cytoplasmic
polyadenylation element binding protein CPEB2b protein.
Length = 559
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPPP 537
GGGGGG F PPPPPP
Sbjct: 45 GGGGGGFGGPFSATAVPPPPPP 66
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPP 540
P GGGGG F PPPPPP
Sbjct: 42 PTSGGGGGGFGGPFSATAVPPPPPP 66
>AY247744-1|AAP37585.1| 589|Homo sapiens cytoplasmic
polyadenylation element binding protein CPEB2 protein.
Length = 589
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPPP 537
GGGGGG F PPPPPP
Sbjct: 45 GGGGGGFGGPFSATAVPPPPPP 66
Score = 31.9 bits (69), Expect = 3.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPP 540
P GGGGG F PPPPPP
Sbjct: 42 PTSGGGGGGFGGPFSATAVPPPPPP 66
>AL035425-2|CAB90290.1| 1257|Homo sapiens insulin receptor substrate
4 protein.
Length = 1257
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 559 PPPPPPPPXXXKKKKKKGXXGGXXXFFF 476
PPPPPPPP KG GG +F
Sbjct: 630 PPPPPPPPPPAGGTGGKGKSGGRFRLYF 657
>AF007567-1|AAC51738.1| 1257|Homo sapiens insulin receptor substrate
4 protein.
Length = 1257
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 559 PPPPPPPPXXXKKKKKKGXXGGXXXFFF 476
PPPPPPPP KG GG +F
Sbjct: 630 PPPPPPPPPPAGGTGGKGKSGGRFRLYF 657
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 26.6 bits (56), Expect(2) = 2.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 559 PPPPPPPP 536
PPPPPPPP
Sbjct: 330 PPPPPPPP 337
Score = 24.2 bits (50), Expect(2) = 2.4
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -3
Query: 556 PPPPPPPXXXKKKKKKGXXGG 494
PPPPPPP GG
Sbjct: 346 PPPPPPPPPLPNSPAPPNPGG 366
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 368 PPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 368 PPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>BX649186-1|CAE46204.1| 669|Homo sapiens hypothetical protein
protein.
Length = 669
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 563 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 595
>BC068504-1|AAH68504.1| 849|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 849
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 300 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 332
>BC048963-1|AAH48963.1| 849|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 849
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 300 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 332
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 614 PXPXGGGGGGXXXF-FXXXPPPPPPPP 537
P P G G F F PPPPPPPP
Sbjct: 50 PPPVGSMGALTAAFPFAALPPPPPPPP 76
>BC034952-1|AAH34952.1| 849|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 849
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 300 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 332
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 368 PPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 380 PPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 412
>AY818645-1|AAW78862.1| 1112|Homo sapiens diaphanous-related formin
3 protein.
Length = 1112
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 563 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 595
>AY750055-1|AAW73254.1| 1152|Homo sapiens diaphanous homolog 3
protein.
Length = 1152
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 563 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 595
>AL390878-5|CAI14158.2| 1193|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1193
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 563 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 595
>AL390878-4|CAM19740.1| 1123|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1123
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 493 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 525
>AL390878-3|CAM19739.1| 1182|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1182
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 552 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 584
>AL390878-2|CAM19741.1| 1147|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1147
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 517 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 549
>AL390878-1|CAM19738.1| 1112|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1112
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 563 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 595
>AL359266-4|CAM15405.1| 1193|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1193
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 563 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 595
>AL359266-3|CAM15403.1| 1123|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1123
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 493 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 525
>AL359266-2|CAM15406.1| 1182|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1182
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 552 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 584
>AL359266-1|CAM15404.1| 1147|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1147
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 517 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 549
>AL356502-5|CAI14102.2| 1193|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1193
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 563 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 595
>AL356502-4|CAM19400.1| 1123|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1123
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 493 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 525
>AL356502-3|CAM19399.1| 1182|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1182
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 552 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 584
>AL356502-2|CAM19401.1| 1147|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1147
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 517 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 549
>AL356502-1|CAM19398.1| 1112|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1112
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 563 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 595
>AL354829-5|CAM14267.1| 1193|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1193
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 563 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 595
>AL354829-4|CAM14265.1| 1123|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1123
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 493 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 525
>AL354829-3|CAI39756.2| 1182|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1182
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 552 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 584
>AL354829-2|CAM14266.1| 1147|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1147
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 517 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 549
>AL354829-1|CAI39757.2| 1112|Homo sapiens diaphanous homolog 3
(Drosophila) protein.
Length = 1112
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 563 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 595
>AK092024-1|BAC03793.1| 699|Homo sapiens protein ( Homo sapiens
cDNA FLJ34705 fis, clone MESAN2003035, highly similar to
Mus musculus diaphanous-related formin (Dia2) mRNA. ).
Length = 699
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 563 PPSKEGGTGHSALPPPPPLPSGGGVLPPPPPPP 595
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 368 PPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>AB244758-1|BAE96352.1| 1123|Homo sapiens mammalian diaphanous
homologue 2_splice_variant2 protein.
Length = 1123
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 493 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 525
>AB244757-1|BAE96351.1| 1147|Homo sapiens mammalian diaphanous
homologue 2_splice_variant1 protein.
Length = 1147
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 517 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 549
>AB244756-1|BAE96350.1| 1182|Homo sapiens mammalian diaphanous
homologue 2 protein.
Length = 1182
Score = 31.5 bits (68), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 792 PPXXXXGGXXXGXXTTPXXXXGGXXXPPPPPPP 694
PP G P GG PPPPPPP
Sbjct: 552 PPSKEGGTGHSALPPPPPLPSGGGVPPPPPPPP 584
>U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron
protein SMN protein.
Length = 294
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P P G G F PPPPPPPP
Sbjct: 201 PGPRLGPGKPGLKFNGPPPPPPPPPP 226
>U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron
protein.
Length = 294
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P P G G F PPPPPPPP
Sbjct: 201 PGPRLGPGKPGLKFNGPPPPPPPPPP 226
>U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known if
this copy of the gene protein.
Length = 293
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P P G G F PPPPPPPP
Sbjct: 200 PGPRLGPGKPGLKFNGPPPPPPPPPP 225
>U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy
determining gene protein.
Length = 294
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P P G G F PPPPPPPP
Sbjct: 201 PGPRLGPGKPGLKFNGPPPPPPPPPP 226
>BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuron
2, centromeric protein.
Length = 282
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P P G G F PPPPPPPP
Sbjct: 201 PGPRLGPGKPGLKFNGPPPPPPPPPP 226
>BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P P G G F PPPPPPPP
Sbjct: 201 PGPRLGPGKPGLKFNGPPPPPPPPPP 226
>BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P P G G F PPPPPPPP
Sbjct: 201 PGPRLGPGKPGLKFNGPPPPPPPPPP 226
>BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein.
Length = 282
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P P G G F PPPPPPPP
Sbjct: 201 PGPRLGPGKPGLKFNGPPPPPPPPPP 226
>AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuron 1
product protein.
Length = 294
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P P G G F PPPPPPPP
Sbjct: 201 PGPRLGPGKPGLKFNGPPPPPPPPPP 226
>AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1
protein protein.
Length = 294
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P P G G F PPPPPPPP
Sbjct: 201 PGPRLGPGKPGLKFNGPPPPPPPPPP 226
>X69438-1|CAA49214.1| 486|Homo sapiens zinc finger protein protein.
Length = 486
Score = 30.7 bits (66), Expect = 7.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 556 PPPPPPPXXXKKKKKKGXXGG 494
PPPPP P K ++KG GG
Sbjct: 344 PPPPPTPFPQAKARRKGRRGG 364
>X60104-1|CAA42698.1| 486|Homo sapiens zinc finger protein protein.
Length = 486
Score = 30.7 bits (66), Expect = 7.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 556 PPPPPPPXXXKKKKKKGXXGG 494
PPPPP P K ++KG GG
Sbjct: 344 PPPPPTPFPQAKARRKGRRGG 364
>AC010913-4|AAX88903.1| 486|Homo sapiens unknown protein.
Length = 486
Score = 30.7 bits (66), Expect = 7.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 556 PPPPPPPXXXKKKKKKGXXGG 494
PPPPP P K ++KG GG
Sbjct: 344 PPPPPTPFPQAKARRKGRRGG 364
>BC131534-1|AAI31535.1| 1386|Homo sapiens DEAH (Asp-Glu-Ala-Asp/His)
box polypeptide 57 protein.
Length = 1386
Score = 25.0 bits (52), Expect(2) = 8.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 537 GGGGGGGGXXXKK 575
GGGGGGGG +K
Sbjct: 40 GGGGGGGGGGNRK 52
Score = 23.8 bits (49), Expect(2) = 8.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 465 KGGXKKXXXXXXXXXXXXXXXXXXGGGGGGGG 560
KGG K GGGGGGGG
Sbjct: 13 KGGGKGSSRGGRGGRSHASKSHGSGGGGGGGG 44
>BC060778-1|AAH60778.2| 658|Homo sapiens DHX57 protein protein.
Length = 658
Score = 25.0 bits (52), Expect(2) = 9.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 537 GGGGGGGGXXXKK 575
GGGGGGGG +K
Sbjct: 40 GGGGGGGGGGNRK 52
Score = 23.8 bits (49), Expect(2) = 9.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 465 KGGXKKXXXXXXXXXXXXXXXXXXGGGGGGGG 560
KGG K GGGGGGGG
Sbjct: 13 KGGGKGSSRGGRGGRSHASKSHGSGGGGGGGG 44
>D38305-1|BAA07423.1| 345|Homo sapiens Tob protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 559 PPPPPPPPXXXKKKKKKGXXGGXXXFFF 476
PPPPPPPP +++K F F
Sbjct: 249 PPPPPPPPQQQQQQKTSALSPNAKEFIF 276
>CR541686-1|CAG46487.1| 345|Homo sapiens TOB1 protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 559 PPPPPPPPXXXKKKKKKGXXGGXXXFFF 476
PPPPPPPP +++K F F
Sbjct: 249 PPPPPPPPQQQQQQKTSALSPNAKEFIF 276
>CR536487-1|CAG38726.1| 345|Homo sapiens TOB1 protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 559 PPPPPPPPXXXKKKKKKGXXGGXXXFFF 476
PPPPPPPP +++K F F
Sbjct: 249 PPPPPPPPQQQQQQKTSALSPNAKEFIF 276
>BT019381-1|AAV38188.1| 345|Homo sapiens transducer of ERBB2, 1
protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 559 PPPPPPPPXXXKKKKKKGXXGGXXXFFF 476
PPPPPPPP +++K F F
Sbjct: 249 PPPPPPPPQQQQQQKTSALSPNAKEFIF 276
>BT019380-1|AAV38187.1| 345|Homo sapiens transducer of ERBB2, 1
protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 559 PPPPPPPPXXXKKKKKKGXXGGXXXFFF 476
PPPPPPPP +++K F F
Sbjct: 249 PPPPPPPPQQQQQQKTSALSPNAKEFIF 276
>BC098415-1|AAH98415.1| 345|Homo sapiens transducer of ERBB2, 1
protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 559 PPPPPPPPXXXKKKKKKGXXGGXXXFFF 476
PPPPPPPP +++K F F
Sbjct: 249 PPPPPPPPQQQQQQKTSALSPNAKEFIF 276
>BC070493-1|AAH70493.1| 345|Homo sapiens transducer of ERBB2, 1
protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 559 PPPPPPPPXXXKKKKKKGXXGGXXXFFF 476
PPPPPPPP +++K F F
Sbjct: 249 PPPPPPPPQQQQQQKTSALSPNAKEFIF 276
>BC031406-1|AAH31406.1| 345|Homo sapiens transducer of ERBB2, 1
protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 559 PPPPPPPPXXXKKKKKKGXXGGXXXFFF 476
PPPPPPPP +++K F F
Sbjct: 249 PPPPPPPPQQQQQQKTSALSPNAKEFIF 276
>AY950677-1|AAY34145.1| 520|Homo sapiens MEX3A protein.
Length = 520
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPPP 537
GGGGGG PP P PPP
Sbjct: 62 GGGGGGGAPAQPAAPPQPAPPP 83
>AY524047-1|AAS94256.1| 345|Homo sapiens PIG49 protein.
Length = 345
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 559 PPPPPPPPXXXKKKKKKGXXGGXXXFFF 476
PPPPPPPP +++K F F
Sbjct: 249 PPPPPPPPQQQQQQKTSALSPNAKEFIF 276
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,758,336
Number of Sequences: 237096
Number of extensions: 2078488
Number of successful extensions: 57314
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 5157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28554
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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