Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_A17
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 35 0.088
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 35 0.088
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 35 0.088
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 35 0.088
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 34 0.12
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 0.19
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.62
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.62
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.62
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.82
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 1.3
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 1.9
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 1.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 22 2.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 22 2.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 3.1
U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 24 4.8
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.8
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 5.8
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 5.8
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 7.7
U14634-2|AAA21560.2| 423|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 34.7 bits (76), Expect = 0.088
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 608 PXGGGGGGXXXFFXXXPPPPPPPP 537
P GGGGGG PPPPPPP
Sbjct: 80 PYGGGGGGGYGRPQGYVPPPPPPP 103
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 614 PXPXGGGGG-GXXXFFXXXPPPPPPPP 537
P GGGGG G + PPPPP P
Sbjct: 80 PYGGGGGGGYGRPQGYVPPPPPPPTQP 106
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 34.7 bits (76), Expect = 0.088
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPPPXXXXKKKKK 510
GGG G + PPPPPPPP +KK+
Sbjct: 52 GGGCGYGGGYGCGIPPPPPPPPQCGCGRKKR 82
Score = 32.3 bits (70), Expect = 0.47
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPPPXXXXKKKKK 510
GGGG G + PPPPPPP +KK
Sbjct: 51 GGGGCGYGGGYGCGIPPPPPPPPQCGCGRKK 81
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 34.7 bits (76), Expect = 0.088
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -2
Query: 599 GGGGGXXXFFXXXPPPPPPPP 537
GGGGG PPPPPPPP
Sbjct: 50 GGGGGSYAAAPALPPPPPPPP 70
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPP 540
GGGGG PPPPPPP
Sbjct: 50 GGGGGSYAAAPALPPPPPPPP 70
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 34.7 bits (76), Expect = 0.088
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -2
Query: 599 GGGGGXXXFFXXXPPPPPPPP 537
GGGGG PPPPPPPP
Sbjct: 50 GGGGGSYAAAPALPPPPPPPP 70
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPP 540
GGGGG PPPPPPP
Sbjct: 50 GGGGGSYAAAPALPPPPPPPP 70
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXP---PPPPPPP 537
G GGGG FF P PPPPPPP
Sbjct: 214 GTGGGGNNGFFVPVPVVIPPPPPPP 238
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.3 bits (60), Expect(2) = 0.19
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPP 543
GGGGGG PPPPP
Sbjct: 26 GGGGGGCAPAAPACAPPPPP 45
Score = 26.6 bits (56), Expect(2) = 2.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 608 PXGGGGGGXXXFFXXXPPPPPPPP 537
P GGGGG P PPPP
Sbjct: 21 PMAGGGGGGGGCAPAAPACAPPPP 44
Score = 24.2 bits (50), Expect(2) = 0.19
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 560 PPPPPPPPXXXXKKKKK 510
PPPPPPP +KK
Sbjct: 54 PPPPPPPMCGCGCGRKK 70
Score = 22.2 bits (45), Expect(2) = 2.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 560 PPPPPPPPXXXXKKKKK 510
PPPPPP +KK+
Sbjct: 55 PPPPPPMCGCGCGRKKR 71
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -1
Query: 792 PPXXXXGGXXX--GXXTTPXXXXGGXXXPPPPPPP 694
PP GG G P GG PPPPPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 713 PPPPPPXXXXXXXXXXXLXXXXXXXXXXGEKXXPXPXGGGGGGXXXFFXXXPPPPPPPPX 534
PPPPPP P P GG PPPPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG--------CPPPPPPPPP 777
Query: 533 XXXK 522
K
Sbjct: 778 GGFK 781
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -2
Query: 710 PPPPPXXXXXXXXXXXLXXXXXXXXXXGEKXXPXPXGGGGGGXXXFFXXXPPPPPPP 540
PPPPP P P GG GG PPPPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG--------PPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -1
Query: 792 PPXXXXGGXXX--GXXTTPXXXXGGXXXPPPPPPP 694
PP GG G P GG PPPPPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 713 PPPPPPXXXXXXXXXXXLXXXXXXXXXXGEKXXPXPXGGGGGGXXXFFXXXPPPPPPPPX 534
PPPPPP P P GG PPPPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG--------CPPPPPPPPP 777
Query: 533 XXXK 522
K
Sbjct: 778 GGFK 781
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -2
Query: 710 PPPPPXXXXXXXXXXXLXXXXXXXXXXGEKXXPXPXGGGGGGXXXFFXXXPPPPPPP 540
PPPPP P P GG GG PPPPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG--------PPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -1
Query: 792 PPXXXXGGXXX--GXXTTPXXXXGGXXXPPPPPPP 694
PP GG G P GG PPPPPPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 713 PPPPPPXXXXXXXXXXXLXXXXXXXXXXGEKXXPXPXGGGGGGXXXFFXXXPPPPPPPPX 534
PPPPPP P P GG PPPPPPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG--------CPPPPPPPPP 360
Query: 533 XXXK 522
K
Sbjct: 361 GGFK 364
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -2
Query: 710 PPPPPXXXXXXXXXXXLXXXXXXXXXXGEKXXPXPXGGGGGGXXXFFXXXPPPPPPP 540
PPPPP P P GG GG PPPPPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG--------PPPPPPP 373
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPPP 537
G GGG PPPPPPPP
Sbjct: 288 GSSGGGGYSAPAAAPPPPPPPP 309
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 596 GGGGXXXFFXXXPPPPPPPP 537
GGGG PPPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPPPP 310
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPPP 537
GGGG PPPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPP 312
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPPP 537
G GGG PPPPPPPP
Sbjct: 288 GSSGGGGYSAPAAAPPPPPPPP 309
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 596 GGGGXXXFFXXXPPPPPPPP 537
GGGG PPPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPPPP 310
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPPP 537
GGGG PPPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPP 312
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.5 bits (58), Expect(2) = 1.3
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 559 PPPPPPPPXXXK 524
PPPPPPPP K
Sbjct: 1356 PPPPPPPPTMSK 1367
Score = 21.8 bits (44), Expect(2) = 1.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 550 PPPPPXXXKKKKK 512
PPPPP ++KK
Sbjct: 1390 PPPPPPLPSEEKK 1402
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 774 GGXXXGXXTTPXXXXGGXXXPPPPPPP 694
GG P GG PPPPPPP
Sbjct: 655 GGSSMPMPVPPPGGLGGFMPPPPPPPP 681
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P P GG GG PPPPPPPP
Sbjct: 662 PVPPPGGLGGFM------PPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 774 GGXXXGXXTTPXXXXGGXXXPPPPPPP 694
GG P GG PPPPPPP
Sbjct: 655 GGSSMPMPVPPPGGLGGFMPPPPPPPP 681
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPPPPP 537
P P GG GG PPPPPPPP
Sbjct: 662 PVPPPGGLGGFM------PPPPPPPP 681
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 21.8 bits (44), Expect(4) = 2.5
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = -2
Query: 749 PXXXXXEGGXXXPPPPPP 696
P G PPPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPPP 314
Score = 21.0 bits (42), Expect(4) = 2.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2
Query: 560 PPPPPP 543
PPPPPP
Sbjct: 344 PPPPPP 349
Score = 21.0 bits (42), Expect(4) = 2.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2
Query: 554 PPPPPP 537
PPPPPP
Sbjct: 358 PPPPPP 363
Score = 20.6 bits (41), Expect(4) = 2.5
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPP 546
P P G G PPPPP
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPP 332
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 21.8 bits (44), Expect(4) = 2.5
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = -2
Query: 749 PXXXXXEGGXXXPPPPPP 696
P G PPPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPPP 304
Score = 21.0 bits (42), Expect(4) = 2.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2
Query: 560 PPPPPP 543
PPPPPP
Sbjct: 334 PPPPPP 339
Score = 21.0 bits (42), Expect(4) = 2.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2
Query: 554 PPPPPP 537
PPPPPP
Sbjct: 348 PPPPPP 353
Score = 20.6 bits (41), Expect(4) = 2.5
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -2
Query: 614 PXPXGGGGGGXXXFFXXXPPPPP 546
P P G G PPPPP
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPP 322
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 27.1 bits (57), Expect(2) = 3.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPPP 540
GGG GG PPPPPP
Sbjct: 39 GGGCGGGGGCGGGCAPPPPPP 59
Score = 21.0 bits (42), Expect(2) = 3.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 608 PXGGGGGG 585
P GGGGGG
Sbjct: 21 PSGGGGGG 28
>U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical
protein T13A10.1 protein.
Length = 155
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 560 PPPPPPPPXXXXKKKKKGE 504
PP PPPPP KK +K E
Sbjct: 50 PPAPPPPPPEAEKKPEKEE 68
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 23.8 bits (49), Expect(2) = 4.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 714 PPPPPPP 694
PPPPPPP
Sbjct: 589 PPPPPPP 595
Score = 23.4 bits (48), Expect(2) = 4.8
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -1
Query: 744 PXXXXGGXXXPPPPPP 697
P G PPPPPP
Sbjct: 569 PQNLSGAPPPPPPPPP 584
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 608 PXGGGGGGXXXFFXXXPPPPPPP 540
P GGGGG PPPPPPP
Sbjct: 20 PSGGGGG-----CGCAPPPPPPP 37
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 608 PXGGGGGGXXXFFXXXPPPPPPP 540
P GGGGG PPPPPPP
Sbjct: 20 PSGGGGG-----CGCAPPPPPPP 37
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 744 PXXXXGGXXXPPPPPPP 694
P GG PPPPPPP
Sbjct: 44 PPPCGGGYEAPPPPPPP 60
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 608 PXGGGGGGXXXFFXXXPPPPPPP 540
P GGGGG PPPPPPP
Sbjct: 20 PSGGGGG-----CGCAPPPPPPP 37
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 602 GGGGGGXXXFFXXXPPPPPP 543
GGG GG PPPPPP
Sbjct: 198 GGGSGGSGGGSGRFPPPPPP 217
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 559 PPPPPPPPXXXKKKKKKGXXGG 494
PPPPPPPP + GG
Sbjct: 534 PPPPPPPPRSSGANGNRNGGGG 555
>U14634-2|AAA21560.2| 423|Caenorhabditis elegans Hypothetical
protein T15B12.2 protein.
Length = 423
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 560 PPPPPPPPXXXXKKKKK 510
PPPPPPPP K+ K
Sbjct: 402 PPPPPPPPQKPPTKQLK 418
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,201,078
Number of Sequences: 27780
Number of extensions: 244640
Number of successful extensions: 8049
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3898
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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