Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_A10
         (920 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.086
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.80 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.8  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   1.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   4.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   5.6  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   9.8  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 30.3 bits (65), Expect = 0.086
 Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
 Frame = -3

Query: 486 PPXGGXPPPXGGXXKKXXGG-XGG--GXXPPPPPXXPXGGXPPP 364
           PP    PPP G       GG  GG  G  PP P     GG  PP
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 25.8 bits (54), Expect = 1.8
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = -3

Query: 468 PPPXGGXXKKXXGGXGGGXXPPPPPXXPXGGXPP 367
           PP   G   +   G   G  PPPPP       PP
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPGGAVLNIPP 545



 Score = 24.2 bits (50), Expect = 5.6
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -2

Query: 409 PPPPPXXPXGGXPPPXKXXXGGG 341
           P PPP  P G  P P      GG
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGG 605


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 0.80
 Identities = 13/39 (33%), Positives = 13/39 (33%)
 Frame = -3

Query: 483 PXGGXPPPXGGXXKKXXGGXGGGXXPPPPPXXPXGGXPP 367
           P GG  P          GG   G   PP P  P  G  P
Sbjct: 271 PMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAP 309


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 366 GGGXPPXGXXGGGGGXXPPXNPP 434
           GGG    G  GGGGG   P   P
Sbjct: 296 GGGGGGGGGGGGGGGSAGPVQQP 318


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 366 GGGXPPXGXXGGGGGXXPPXNPP 434
           GGG    G  GGGGG   P   P
Sbjct: 296 GGGGGGGGGGGGGGGSAGPVQQP 318


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 366 GGGXPPXGXXGGGGGXXPPXNPP 434
           GGG    G  GGGGG   P   P
Sbjct: 248 GGGGGGGGGGGGGGGSAGPVQQP 270


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 4/24 (16%)
 Frame = -3

Query: 423 GGGXXPPPPPXXP----XGGXPPP 364
           G G  PPPPP  P     GG P P
Sbjct: 779 GIGSPPPPPPPPPSSLSPGGVPRP 802


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 369  GGXPPXGXXGGGGG 410
            GG P  G  GGGGG
Sbjct: 1487 GGSPTKGAGGGGGG 1500


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 366 GGGXPPXGXXGGGGGXXPPXNP 431
           GGG    G  GG  G  PP NP
Sbjct: 394 GGGG--GGGDGGSDGKKPPNNP 413


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 16/51 (31%), Positives = 16/51 (31%)
 Frame = -3

Query: 486 PPXGGXPPPXGGXXKKXXGGXGGGXXPPPPPXXPXGGXPPPXXXXXGGGGV 334
           PP  G P P G        G  G   P  PP  P     P      G  GV
Sbjct: 46  PP--GAPGPVGPRGLTGHRGEKGNSGPVGPPGAPGRDGMPGAPGLPGSKGV 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,337
Number of Sequences: 2352
Number of extensions: 9642
Number of successful extensions: 56
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)