Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_A09
(901 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC965.07c |gst2||glutathione S-transferase Gst2|Schizosaccharo... 41 3e-04
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 40 4e-04
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 39 0.001
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 32 0.13
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 28 2.1
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 27 3.6
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 27 4.8
SPBC56F2.12 |ilv5||acetohydroxyacid reductoisomerase|Schizosacch... 26 8.4
>SPCC965.07c |gst2||glutathione S-transferase
Gst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 40.7 bits (91), Expect = 3e-04
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Frame = +1
Query: 316 WESRAIITYLXNKYA--KGSSLYPEDPKARALVDQRLYFDI---GTLYQR--FSDYFYPQ 474
WES AI+ YL +KY + SL +DP+ L+ Q L+F G ++ + + ++F+ +
Sbjct: 69 WESDAILIYLADKYDTDRKISLSFDDPEYYKLI-QYLFFQASGQGVIWGQAGWFNFFHHE 127
Query: 475 VFAGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLI 609
A + +NE ++ L +L+ L+ + Y+ T+ADLS I
Sbjct: 128 PVVSA-VTRYRNE-IKRVLGVLEDILKDRDYLVANKYTIADLSFI 170
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 234 GEQLKPEYLKLNPQHTVPTLVD 299
GEQ E+L LNP VPTLVD
Sbjct: 39 GEQKCKEHLALNPNGRVPTLVD 60
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 40.3 bits (90), Expect = 4e-04
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Frame = +1
Query: 316 WESRAIITYLXNKYAKGSSL-YPEDPKARALVDQRLYFDI---GTLYQRFSDY-FYPQVF 480
WES AI+ YL +KY + P D V Q L+F G ++ + + Y Q
Sbjct: 69 WESDAILIYLADKYDTERKISLPRDHPEYYKVIQYLFFQASGQGIIWGQAGWFSVYHQEL 128
Query: 481 AGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLE 630
+ + +NE ++ L +L+ L+ + Y+ T+ADLS I+ + LE
Sbjct: 129 VISAITRYRNE-IKRVLGVLEDILKDRDYLVANRFTIADLSFISWNNFLE 177
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 237 EQLKPEYLKLNPQHTVPTLVD 299
EQ PE+L LNP VPTL+D
Sbjct: 40 EQKSPEHLALNPNGRVPTLID 60
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 529 LQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETVKSTAPGY 708
L +D L +Y AG T AD + + + + + K Y N+KRW V S P
Sbjct: 148 LDYIDNHLASNEYFAGEQFTAADPQMCFPIFAAQRDYLSQKPYKNIKRWMRVV-SDRPAC 206
Query: 709 QEANEK 726
+ A EK
Sbjct: 207 RIAAEK 212
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 249 PEYLKLNPQHTVPTLVDDGLSIL 317
P Y KL+P P +VDDG++ +
Sbjct: 40 PAYTKLSPLGKSPIVVDDGVTYI 62
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = +1
Query: 502 AKNEKVQEALQLLDKFLEGQ----KYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVK 669
A+ K+ +AL+ ++ E Q KY P L LS A+ S+ S + +
Sbjct: 116 AEKRKILDALKSRKEYFETQALLEKYGEQPTLAQKKLSNAAAAKSVPGSSSSSSDPMHPQ 175
Query: 670 RWYETVKSTAPGYQEANEKGLEA 738
WY+ V G E +E EA
Sbjct: 176 HWYDRVLEGLVGANENSENNREA 198
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 774 SLFKHAIDKSLECLQSFLVGLLVTRSCTLNRLVPS 670
S +K++++ L CL +L+ +TRS T+ + V S
Sbjct: 51 SWYKYSLESGLVCLYLYLIYRWITRSFTVKQTVGS 85
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 27.1 bits (57), Expect = 3.6
Identities = 32/114 (28%), Positives = 49/114 (42%)
Frame = +1
Query: 313 SWESRAIITYLXNKYAKGSSLYPEDPKARALVDQRLYFDIGTLYQRFSDYFYPQVFAGAP 492
S ESR I + ++ S L+P D K A + RL F +G + R + + A +P
Sbjct: 266 SIESRLTIANMTTEWGALSGLFPTDEKLLAWYEDRLKF-LGPNHPRVNRETLDAIKA-SP 323
Query: 493 ADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKK 654
+E A L+ V+GPN + + S ++LE DI KK
Sbjct: 324 I--LADEGAFYAKHLILDLSTLSPAVSGPN----SVKVYNSAATLEKKDILIKK 371
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 661 NVKRWYETVKSTAPGYQEANEKGLEAFKGLVNS 759
+V + YE+++S Y+ ANEK EA +V+S
Sbjct: 739 SVHKNYESLRSQLLEYKAANEKHTEAILSVVSS 771
>SPBC56F2.12 |ilv5||acetohydroxyacid
reductoisomerase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 25.8 bits (54), Expect = 8.4
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Frame = +1
Query: 487 APADKAKNEKVQEALQLLDKFLE--GQKYVAGPNLTVADLSLIA-SVSSLEASDIDFKK- 654
+PA+ A NE V+EA Q L + G Y+ T A I + LEA+ +
Sbjct: 291 SPAE-AFNETVEEATQSLYPLIGKYGLDYMFAACSTTARRGAIDWTPRFLEANKKVLNEL 349
Query: 655 YANVKRWYETVKS----TAPGYQEANEKGLEAFKGL 750
Y NV+ E +S +AP Y+E +K LE + L
Sbjct: 350 YDNVENGNEAKRSLEYNSAPNYRELYDKELEEIRNL 385
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,115,244
Number of Sequences: 5004
Number of extensions: 58870
Number of successful extensions: 182
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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