Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_A08
         (925 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50874-10|CAA90770.1|  302|Caenorhabditis elegans Hypothetical p...    28   8.2  
Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AF106583-2|AAD03129.2|  255|Caenorhabditis elegans Hypothetical ...    28   8.2  

>Z50874-10|CAA90770.1|  302|Caenorhabditis elegans Hypothetical
           protein R10E4.11 protein.
          Length = 302

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
 Frame = -2

Query: 669 EESHYRKIIFGSSVLLCQYLVIFFTVILHADFSYQKFIHVFRVLR-----ECNK-SIVFI 508
           E+SHYR      +V+ C+Y V  F  +      ++K  H+ + LR     +CN+ S+VF 
Sbjct: 211 EKSHYRTSTSKHAVMECRYCVRQFRTVKEV-IEHEKEKHLAKPLRKTQFFKCNECSVVFT 269

Query: 507 S 505
           S
Sbjct: 270 S 270


>Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical
           protein F17C8.3 protein.
          Length = 715

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 2/149 (1%)
 Frame = +1

Query: 364 PVVFLAVLSASLANTSTGSVELDEISFNKVINKF--EASLVKFDVAFPYGDKHDAFVALA 537
           P +FL  L+  L N +T  +    +S+    + F  E  + K  V F  G  H     + 
Sbjct: 406 PFIFLINLNNDLHNRATLGLTTYLVSYRFPCSFFLIELKMTKLRVGF-IGYGHLGKFLVE 464

Query: 538 KDSKDVDELLIAEVGVKDYGEKDNEVLAKKYGATKDNFPVVRLFLKGKNEPIPFDDSQGS 717
           K     +E  I ++  +  GE   + L      T +N   + L ++  +  I  D   G 
Sbjct: 465 KLRLLPEEFEIVKIWNRSVGEPGVQGLET---LTAENLKDIDLVVEVAHPKIIAD--YGE 519

Query: 718 PLMNFDDLFAKTPACI*VTGLREKLRQTS 804
            ++   DLFA +P C     L EKL + S
Sbjct: 520 LILEHCDLFAGSPTCFANQELLEKLTKLS 548


>AF106583-2|AAD03129.2|  255|Caenorhabditis elegans Hypothetical
           protein F23C8.5 protein.
          Length = 255

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 26/99 (26%), Positives = 44/99 (44%)
 Frame = +1

Query: 430 DEISFNKVINKFEASLVKFDVAFPYGDKHDAFVALAKDSKDVDELLIAEVGVKDYGEKDN 609
           DEI+  + +   E  L    VAF  G    A V     +K  D+ +  +V   + G+ ++
Sbjct: 39  DEIALEEAVKLKEKKLATEVVAFSLGGPKSAEVLRTALAKGADKAVHVQVTDAEAGKLES 98

Query: 610 EVLAKKYGATKDNFPVVRLFLKGKNEPIPFDDSQGSPLM 726
             +AK      +      +FL GK + I  D SQ +P++
Sbjct: 99  FHVAKALQKIVEQEKFDAVFL-GK-QAIDDDSSQTAPIL 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,979,199
Number of Sequences: 27780
Number of extensions: 357273
Number of successful extensions: 868
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)