Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_A08
         (925 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   5.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   5.2  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   9.0  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   9.0  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   9.0  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 625 KYGATKDNFPVVRLFLKGKNEPIPFD 702
           KY +    FP   L  KGK E +P++
Sbjct: 590 KYSSQPYGFPERLLLPKGKKEGMPYN 615


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 625 KYGATKDNFPVVRLFLKGKNEPIPFD 702
           KY +    FP   L  KGK E +P++
Sbjct: 590 KYSSQPYGFPERLLLPKGKKEGMPYN 615


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 467 SNLFITLLNEISSNSTEPVDVFAREADST 381
           S+LF+T+  ++     +  D FA  AD T
Sbjct: 176 SSLFVTIAVDVRDTEDKCKDTFAYIADVT 204


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 293 KRITILKHELLSIITIYRLLIVRHA 219
           KRI +LK   L +  +Y+++ V HA
Sbjct: 75  KRIEMLKGTELYVEPVYKMIEVVHA 99


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 293 KRITILKHELLSIITIYRLLIVRHA 219
           KRI +LK   L +  +Y+++ V HA
Sbjct: 75  KRIEMLKGTELYVEPVYKMIEVVHA 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,286
Number of Sequences: 438
Number of extensions: 4565
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)