Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_A07
         (894 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            29   0.14 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            28   0.44 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   0.58 
AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.          24   5.4  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 29.5 bits (63), Expect = 0.14
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
 Frame = +2

Query: 149  SKDASTQTEKP-DLNETSSQTKETFFNIFSKPKPKRARRPIEPYVVKEPQIXKLVIHPED 325
            S+DAS+ T K   +    ++  E FFN  ++ K  +  R + PY+    +  K   H  +
Sbjct: 3019 SQDASSITSKSYKVTNWINEIFEHFFNTENQGKQDQEDRKVNPYLKHHKRPTKTPFHIAN 3078

Query: 326  FYKKNIELSNDNSSDVT 376
             ++ N   S DN + +T
Sbjct: 3079 CFRTN---SADNLNTIT 3092


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 27.9 bits (59), Expect = 0.44
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +2

Query: 149  SKDASTQTEKP-DLNETSSQTKETFFNIFSKPKPKRARRPIEPYVVKEPQIXKLVIHPED 325
            S+DAS+ T     +    ++  E FFN  ++ K  +  R + PY+    +  K   H  +
Sbjct: 3016 SQDASSITSNSYKVTNWINEIFEHFFNTANQGKQDQEDRKVNPYLKHHKRQTKTPFHITN 3075

Query: 326  FYKKNIELSNDNSSDVT 376
             ++ N   S DN + +T
Sbjct: 3076 CFRTN---SADNLNTIT 3089


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 27.5 bits (58), Expect = 0.58
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = +2

Query: 134  TTPKKSKDASTQTEKPDLNETSSQTKETFFNIFSKPKPKRARRPIEPYV 280
            T+P K KD+ T+ ++  L + S      +     +PK  +   P+  Y+
Sbjct: 1592 TSPSKRKDSVTKRDRIILQDESEPNTSQYSTFIHEPKHHQEDPPVLKYI 1640


>AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +2

Query: 56  NYETVLSALCSVISXELRVR---GILALLTTPKKSKDASTQTEKPDLNETSSQTKE 214
           NY + +SA+C  +S  LR R   G+ +      K++ AS   +K  +  T    K+
Sbjct: 60  NYSSTISAICLPLSNSLRNRKHAGLSSYAAGWGKTETASASQKKLKVELTVVDVKD 115


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 788,793
Number of Sequences: 2352
Number of extensions: 13658
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)