Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_A05
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0234 - 6116931-6117052,6117549-6118369,6118573-6118601,611...    31   0.97 
07_03_1632 + 28271559-28271645,28272641-28272713,28273030-282733...    31   1.7  
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903...    30   3.0  
06_01_0865 - 6571056-6571190,6571737-6571977,6572279-6572401,657...    29   3.9  
04_04_1390 - 33184233-33184478,33184601-33184705,33184783-331848...    29   3.9  
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302...    29   5.2  
04_04_1293 - 32418156-32418584,32420155-32420270,32421798-32421864     29   6.8  
02_03_0365 - 18198669-18198809,18198887-18198979,18199078-181991...    29   6.8  
09_01_0027 - 469856-470773,470780-471261,471296-471408,471453-47...    28   9.0  
04_04_1070 + 30579263-30579861,30579970-30580095,30580190-30580394     28   9.0  

>09_02_0234 -
           6116931-6117052,6117549-6118369,6118573-6118601,
           6118711-6119020,6119469-6119476,6120104-6120232,
           6120341-6120445
          Length = 507

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
 Frame = +3

Query: 381 IYQETSHNMAQRSITSFFKKTPFTPMEIKS---NGGSKVSHVNGDTSPISDEKDKPSERQ 551
           I +     MA   +    ++TPF+P++I +     GS +   N D +P            
Sbjct: 233 IMENDKSKMADLHLFKAIQRTPFSPLKIDNVEVIAGSSLQEDNIDYNPEMIGVADDQHSI 292

Query: 552 QSNSIDNDGDSQDSLKPKNKAKRQR 626
            S+  D++ +  D ++  N+ KRQR
Sbjct: 293 SSDDTDHEQEKVDYVEKLNEMKRQR 317


>07_03_1632 +
           28271559-28271645,28272641-28272713,28273030-28273361,
           28273455-28274791,28275451-28275848,28275963-28277644,
           28277727-28277884,28278645-28278802,28279110-28279270,
           28279826-28280014
          Length = 1524

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +3

Query: 471 NGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKA 614
           N    VS  NG   P+SD+  K  E  QS  ++    +QDSL   +K+
Sbjct: 52  NLAPSVSKHNGSMVPLSDDSSK-KEVHQSTKVERASSTQDSLNGLSKS 98


>12_02_1151 +
           26488686-26488792,26488897-26489142,26490246-26490381,
           26490502-26490561,26490648-26490740,26491421-26491663,
           26491828-26491968,26492312-26492482,26492813-26492899,
           26492954-26493211,26493300-26493445,26493535-26493922,
           26493935-26494092,26494267-26494540,26494721-26494894
          Length = 893

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +3

Query: 417 SITSFFKKTPFTPMEIKSNGGSKVSHVNGDTSPISD--EKDKPSERQQSNSIDNDGDSQD 590
           +I   ++K   TP  +  +  S   H+ G +SP+ +  + D  S+  +S SI+N+    +
Sbjct: 593 TIFELYQKV-MTPFRVPKDDSSGADHIIGKSSPVEETTDVDMNSDATESTSINNNDCDDE 651

Query: 591 SL 596
           ++
Sbjct: 652 TM 653


>06_01_0865 -
           6571056-6571190,6571737-6571977,6572279-6572401,
           6572501-6572527,6573954-6574009
          Length = 193

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -3

Query: 558 WIVVFQKACLFRRIWVMCPHLHGLLWIHHYFLFP 457
           W+  +  A LF   W++ P  HG  +++ +F+ P
Sbjct: 69  WLPFWSYAKLFFNCWLVLPCFHGAAYVYDHFVRP 102


>04_04_1390 -
           33184233-33184478,33184601-33184705,33184783-33184890,
           33184967-33185101,33185263-33185363,33185495-33185564,
           33185642-33185758,33186001-33186138,33186371-33186439,
           33186556-33186645,33186758-33186940,33187020-33187052
          Length = 464

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 510 SPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKRQR 626
           S +S+++  P+E  +    DNDGD Q   K   K ++++
Sbjct: 419 SELSNKRPPPTEHVEPTKEDNDGDKQKKRKTGKKHEKKK 457


>09_04_0512 +
           18226981-18227143,18227648-18229555,18229649-18230295,
           18230710-18231949,18232085-18232419,18232500-18232577,
           18232872-18232978,18233020-18233062
          Length = 1506

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 456 MEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDND-GDSQDSLK 599
           M +KS   + VSH N   S I ++     ER    S+DN+ G+S   L+
Sbjct: 829 MSLKSEERNAVSHGNISVSSIHNKTSSSPERYNKASLDNENGNSPGQLQ 877


>04_04_1293 - 32418156-32418584,32420155-32420270,32421798-32421864
          Length = 203

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 522 DEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKR 620
           D+     E  Q N  D + D +DSL+P  K K+
Sbjct: 171 DDGVDEEEEDQDNEDDEEDDDEDSLQPPKKRKK 203


>02_03_0365 -
           18198669-18198809,18198887-18198979,18199078-18199138,
           18199291-18199336,18199417-18199682,18199766-18200744,
           18201012-18201564,18201661-18201909,18201995-18202234
          Length = 875

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = +3

Query: 411 QRSITSFFKKTPFTPMEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQD 590
           ++S+       P  P E  S  GS V+H + + S  SD    PS +++      +GD +D
Sbjct: 17  EQSLAVVVAPEPTVPPEDSS--GSDVAHEDDEYSSPSDPCPSPSPKRRKKGDGEEGD-KD 73

Query: 591 SLKPK 605
            + PK
Sbjct: 74  YIPPK 78


>09_01_0027 -
           469856-470773,470780-471261,471296-471408,471453-472003,
           472089-472328
          Length = 767

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +3

Query: 411 QRSITSFFKKTPFTPMEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQD 590
           ++S+       P  P E  S  GS ++H + + S  SD    PS +++      +GD +D
Sbjct: 17  EQSLAVVVASEPTVPPEDSS--GSDIAHEDDEYSLPSDPCPSPSPKRRKKGDSEEGD-KD 73

Query: 591 SLKPK 605
            + PK
Sbjct: 74  YIPPK 78


>04_04_1070 + 30579263-30579861,30579970-30580095,30580190-30580394
          Length = 309

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = +3

Query: 393 TSHNMAQRSITSFFKKTPFTPMEIKSNGGSKV-SHVNGDTSPISDEKDKPSERQQSNSID 569
           T  N+   + TS    + F+ +       SK  S ++    P+S  K KP     S +  
Sbjct: 130 TKPNLTMSAATSVTSTSFFSSVTAGEGSVSKGRSLLSSGKPPLSGHKRKPCAGGHSEATA 189

Query: 570 NDGDSQDSLKPKNKAKR 620
           N G    S + KN+ KR
Sbjct: 190 NGGRCHCSKRRKNRVKR 206


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,073,754
Number of Sequences: 37544
Number of extensions: 379267
Number of successful extensions: 947
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)