Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_A03
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.023
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.023
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.030
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.030
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.030
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.069
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.069
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.069
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 33 0.21
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 32 0.49
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 32 0.65
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.65
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 30 2.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.6
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.6
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 4.5
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 6.0
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 6.0
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 6.0
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.023
Identities = 30/100 (30%), Positives = 31/100 (31%), Gaps = 3/100 (3%)
Frame = +2
Query: 407 PPXPXXXGFXFWXPXPFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRX 586
PP P G W P P PP P G PPP P G P R
Sbjct: 287 PPPPPSSGM--WPPPP-PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 343
Query: 587 XXG---PXP*XGPXGGXXPXXPPPXXTXKKXPPHXXGGXP 697
G P P P G PPP + PP G P
Sbjct: 344 PGGMPPPPPPRYPSAGPG-MYPPPPPSRPPAPPSGHGMIP 382
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.7 bits (81), Expect = 0.023
Identities = 30/100 (30%), Positives = 31/100 (31%), Gaps = 3/100 (3%)
Frame = +2
Query: 407 PPXPXXXGFXFWXPXPFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRX 586
PP P G W P P PP P G PPP P G P R
Sbjct: 297 PPPPPSSGM--WPPPP-PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 353
Query: 587 XXG---PXP*XGPXGGXXPXXPPPXXTXKKXPPHXXGGXP 697
G P P P G PPP + PP G P
Sbjct: 354 PGGMPPPPPPRYPSAGPG-MYPPPPPSRPPAPPSGHGMIP 392
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/84 (27%), Positives = 26/84 (30%), Gaps = 2/84 (2%)
Frame = +2
Query: 452 PFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPXGGXX 631
P PP P +G G PPP G P P + P G
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 632 PXXPPPXXTXK--KXPPHXXGGXP 697
P PPP + PP GG P
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSP 321
Score = 32.7 bits (71), Expect = 0.37
Identities = 23/74 (31%), Positives = 26/74 (35%)
Frame = +2
Query: 452 PFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPXGGXX 631
P PP P P +GG PP G P RG P G P P G
Sbjct: 273 PPPPTGSPPPPPAGGSP-PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP---PAGTGS 328
Query: 632 PXXPPPXXTXKKXP 673
P PPP ++ P
Sbjct: 329 P--PPPPRQKRQAP 340
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +2
Query: 407 PPXPXXXGFXFWXPXPFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRX 586
PP P G P P P P S PPP G P G P R
Sbjct: 280 PPPPPAGGSPP-PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQ 338
Query: 587 XXGPXP*XG-PXGGXXPXXPPP 649
P G P G P PP
Sbjct: 339 APERSPPTGSPPTGSPPTGRPP 360
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/84 (27%), Positives = 26/84 (30%), Gaps = 2/84 (2%)
Frame = +2
Query: 452 PFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPXGGXX 631
P PP P +G G PPP G P P + P G
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 632 PXXPPPXXTXK--KXPPHXXGGXP 697
P PPP + PP GG P
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSP 342
Score = 32.7 bits (71), Expect = 0.37
Identities = 23/74 (31%), Positives = 26/74 (35%)
Frame = +2
Query: 452 PFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPXGGXX 631
P PP P P +GG PP G P RG P G P P G
Sbjct: 294 PPPPTGSPPPPPAGGSP-PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP---PAGTGS 349
Query: 632 PXXPPPXXTXKKXP 673
P PPP ++ P
Sbjct: 350 P--PPPPRQKRQAP 361
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +2
Query: 407 PPXPXXXGFXFWXPXPFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRX 586
PP P G P P P P S PPP G P G P R
Sbjct: 301 PPPPPAGGSPP-PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQ 359
Query: 587 XXGPXP*XG-PXGGXXPXXPPP 649
P G P G P PP
Sbjct: 360 APERSPPTGSPPTGSPPTGRPP 381
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/84 (27%), Positives = 26/84 (30%), Gaps = 2/84 (2%)
Frame = +2
Query: 452 PFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPXGGXX 631
P PP P +G G PPP G P P + P G
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 632 PXXPPPXXTXK--KXPPHXXGGXP 697
P PPP + PP GG P
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSP 327
Score = 32.7 bits (71), Expect = 0.37
Identities = 23/74 (31%), Positives = 26/74 (35%)
Frame = +2
Query: 452 PFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPXGGXX 631
P PP P P +GG PP G P RG P G P P G
Sbjct: 279 PPPPTGSPPPPPAGGSP-PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP---PAGTGS 334
Query: 632 PXXPPPXXTXKKXP 673
P PPP ++ P
Sbjct: 335 P--PPPPRQKRQAP 346
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +2
Query: 407 PPXPXXXGFXFWXPXPFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRX 586
PP P G P P P P S PPP G P G P R
Sbjct: 286 PPPPPAGGSPP-PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQ 344
Query: 587 XXGPXP*XG-PXGGXXPXXPPP 649
P G P G P PP
Sbjct: 345 APERSPPTGSPPTGSPPTGRPP 366
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.069
Identities = 23/73 (31%), Positives = 24/73 (32%)
Frame = +2
Query: 458 PPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPXGGXXPX 637
PP P +GG PPP GG P GP P P GG P
Sbjct: 713 PPPPPGLPPITGGPP-PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 638 XPPPXXTXKKXPP 676
PPP K P
Sbjct: 772 PPPPPPGGFKGGP 784
Score = 31.5 bits (68), Expect = 0.85
Identities = 30/92 (32%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Frame = +2
Query: 407 PPXPXXXGFX-FWXPXPFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXR 583
PP P G P PP P SGG PPP GG P P F
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP---PPPPGGFK-- 781
Query: 584 XXXGPXP*XGPXGGXXPXXP--PPXXTXKKXP 673
GP P P G P P P KK P
Sbjct: 782 --GGPPP-PPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +2
Query: 503 GXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPX--GGXXPXXPPPXXTXKKXPP 676
G PP GG P G P P P P GG P PPP PP
Sbjct: 718 GLPPITGGPPPPPPPGGLPP---ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 677 HXXGG 691
GG
Sbjct: 775 PPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.069
Identities = 23/73 (31%), Positives = 24/73 (32%)
Frame = +2
Query: 458 PPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPXGGXXPX 637
PP P +GG PPP GG P GP P P GG P
Sbjct: 713 PPPPPGLPPITGGPP-PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 638 XPPPXXTXKKXPP 676
PPP K P
Sbjct: 772 PPPPPPGGFKGGP 784
Score = 31.5 bits (68), Expect = 0.85
Identities = 30/92 (32%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Frame = +2
Query: 407 PPXPXXXGFX-FWXPXPFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXR 583
PP P G P PP P SGG PPP GG P P F
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP---PPPPGGFK-- 781
Query: 584 XXXGPXP*XGPXGGXXPXXP--PPXXTXKKXP 673
GP P P G P P P KK P
Sbjct: 782 --GGPPP-PPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +2
Query: 503 GXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPX--GGXXPXXPPPXXTXKKXPP 676
G PP GG P G P P P P GG P PPP PP
Sbjct: 718 GLPPITGGPPPPPPPGGLPP---ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 677 HXXGG 691
GG
Sbjct: 775 PPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.069
Identities = 23/73 (31%), Positives = 24/73 (32%)
Frame = +2
Query: 458 PPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPXGGXXPX 637
PP P +GG PPP GG P GP P P GG P
Sbjct: 296 PPPPPGLPPITGGPP-PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 638 XPPPXXTXKKXPP 676
PPP K P
Sbjct: 355 PPPPPPGGFKGGP 367
Score = 31.5 bits (68), Expect = 0.85
Identities = 30/92 (32%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Frame = +2
Query: 407 PPXPXXXGFX-FWXPXPFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXR 583
PP P G P PP P SGG PPP GG P P F
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP---PPPPGGFK-- 364
Query: 584 XXXGPXP*XGPXGGXXPXXP--PPXXTXKKXP 673
GP P P G P P P KK P
Sbjct: 365 --GGPPP-PPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +2
Query: 503 GXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPX--GGXXPXXPPPXXTXKKXPP 676
G PP GG P G P P P P GG P PPP PP
Sbjct: 301 GLPPITGGPPPPPPPGGLPP---ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Query: 677 HXXGG 691
GG
Sbjct: 358 PPPGG 362
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = +2
Query: 446 PXPFPPXXXPXPXXSGGGXGXPPPXG--GXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPX 619
P P P P GGG G P P G G P G P + GP
Sbjct: 150 PGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPS 209
Query: 620 GGXXPXXPP 646
G P PP
Sbjct: 210 GAPGPQGPP 218
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 32.3 bits (70), Expect = 0.49
Identities = 24/82 (29%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = +2
Query: 446 PXPFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRG-XPXKKXFNXRXXXGPXP*XGPXG 622
P P P P SG P P G P G P N GP P GP G
Sbjct: 991 PSPNGPSDPVKPSPSGPSPNGPSPNGPSPNGPSPNGPSPNGPTPNWPSPNGPSP-NGPNG 1049
Query: 623 GXXPXXPPPXXTXKKXPPHXXG 688
P P P P+ G
Sbjct: 1050 PSDPNKPGPNGPNGPSDPNKPG 1071
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 31.9 bits (69), Expect = 0.65
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = +2
Query: 446 PXPFPPXXXPXPXXSGGGXGXPPPXG--GXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPX 619
P P P P GGG G P P G G P G P + GP
Sbjct: 148 PGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPS 207
Query: 620 GGXXPXXPP 646
G P PP
Sbjct: 208 GRPGPQGPP 216
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/78 (28%), Positives = 23/78 (29%)
Frame = +2
Query: 458 PPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPXGGXXPX 637
PP P G G PPP P G P + P P GP G
Sbjct: 334 PPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGA---F 390
Query: 638 XPPPXXTXKKXPPHXXGG 691
PPP P GG
Sbjct: 391 APPPSAFGAPQGPGGPGG 408
Score = 31.5 bits (68), Expect = 0.85
Identities = 25/80 (31%), Positives = 25/80 (31%)
Frame = +2
Query: 458 PPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPXGGXXPX 637
PP P GG G PP G P G P GP P GP G P
Sbjct: 393 PPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQ----GGPGGFGPPPPGGP-GAYGP- 446
Query: 638 XPPPXXTXKKXPPHXXGGXP 697
PP PP G P
Sbjct: 447 -PPTGFPPVGAPPPGAAGAP 465
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 407 PPXPXXXGFXFWXPXPFPPXXXPXPXXSGGGXGXP 511
PP P G P FPP P P +G G P
Sbjct: 435 PPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNP 469
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +2
Query: 410 PXPXXXGFXFWXPXPFPPXXXPXPXXSGGGXGXPPP-XGGXXXXPXXRGXP 559
P P GF P P P P P GG PPP GG P G P
Sbjct: 66 PPPVPNGFI--PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP 114
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/69 (28%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
Frame = +2
Query: 446 PXPFPPXXXPXPXXSGGGXGXPPPXG--GXXXXPXXRGXPXKKXFNXRXXXGPXP*XGPX 619
P P P P GGG G P P G G P G P + GP
Sbjct: 150 PGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPS 209
Query: 620 GGXXPXXPP 646
G PP
Sbjct: 210 GAPGSQGPP 218
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 523 PXGGXXTXXPXXXPGXXGXXGGEXXXXPKXKPXXPGGGG 407
P G P PG G GG P P PGG G
Sbjct: 203 PAGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPG 241
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 523 PXGGXXTXXPXXXPGXXGXXGGEXXXXPKXKPXXPGGGG 407
P G P PG G GG P P PGG G
Sbjct: 203 PSGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPG 241
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 446 PXPFPPXXXPXPXXSGGGXGXPPPXG 523
P P PP P GG G PPP G
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPG 794
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 446 PXPFPPXXXPXPXXSGGGXGXPPPXG 523
P P PP P GG G PPP G
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPG 794
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 29.9 bits (64), Expect = 2.6
Identities = 29/99 (29%), Positives = 31/99 (31%), Gaps = 8/99 (8%)
Frame = +2
Query: 416 PXXXGFXFWXPX-PFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXR-XX 589
P F F P P P P P GG G P G P RG P + +
Sbjct: 126 PDASQFCFDCPEAPAGPPGRPGPDGENGGAG-EPGRDGLAGRPGARGSPGPRGPSGNPGA 184
Query: 590 XGPXP*XGPXGGXXPXXPP------PXXTXKKXPPHXXG 688
GP GP GG P P K PP G
Sbjct: 185 DGPAGQLGPQGGSNVAPSPAGEPGAPGAQGPKGPPGAAG 223
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 29.9 bits (64), Expect = 2.6
Identities = 29/99 (29%), Positives = 31/99 (31%), Gaps = 8/99 (8%)
Frame = +2
Query: 416 PXXXGFXFWXPX-PFPPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXR-XX 589
P F F P P P P P GG G P G P RG P + +
Sbjct: 179 PDASQFCFDCPEAPAGPPGRPGPDGENGGAG-EPGRDGLAGRPGARGSPGPRGPSGNPGA 237
Query: 590 XGPXP*XGPXGGXXPXXPP------PXXTXKKXPPHXXG 688
GP GP GG P P K PP G
Sbjct: 238 DGPAGQLGPQGGSNVAPSPAGEPGAPGAQGPKGPPGAAG 276
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 446 PXPFPPXXXPXPXXSGGGXGXPPPXG 523
P P PP P GG G PPP G
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPG 794
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 446 PXPFPPXXXPXPXXSGGGXGXPPPXG 523
P P PP P GG G PPP G
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPG 794
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
Frame = +2
Query: 407 PPXPXXXGFXFWXPXPFPPXXXPX---PXXSGGGXGXPPPXGG 526
PP P G P P P P GGG G P P GG
Sbjct: 34 PPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/81 (28%), Positives = 24/81 (29%), Gaps = 1/81 (1%)
Frame = +2
Query: 458 PPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFNXR-XXXGPXP*XGPXGGXXP 634
PP P P G G P P G G P + N GP GP G P
Sbjct: 134 PPPCKPCPEGPPGPAGPPGPDGNKGPL-GPPGPPGPEGPNGEPGNKGPAGPPGPGGKPGP 192
Query: 635 XXPPPXXTXKKXPPHXXGGXP 697
PP P G P
Sbjct: 193 AGPPGENGNNGEPQPGAPGEP 213
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.0
Identities = 23/81 (28%), Positives = 24/81 (29%), Gaps = 1/81 (1%)
Frame = +2
Query: 458 PPXXXPXPXXSGGGXGXPPPXGGXXXXPXXRGXPXKKXFN-XRXXXGPXP*XGPXGGXXP 634
PP P P G G P P G G P + N GP GP G P
Sbjct: 132 PPPCKPCPEGPPGPAGPPGPQGNKGPL-GPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGP 190
Query: 635 XXPPPXXTXKKXPPHXXGGXP 697
PP P G P
Sbjct: 191 AGPPGENGRNGEPQPGSPGEP 211
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 446 PXPFPPXXXPXPXXSGGGXGXPPPXG 523
P P PP P P GG PPP G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLG 796
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 446 PXPFPPXXXPXPXXSGGGXGXPPPXG 523
P P PP P P GG PPP G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLG 796
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,251,942
Number of Sequences: 27780
Number of extensions: 142276
Number of successful extensions: 1136
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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