Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_A02
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 211 3e-54
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 211 3e-54
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 211 3e-54
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 211 3e-54
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 211 3e-54
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 123 1e-27
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 44 7e-04
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 211 bits (515), Expect = 3e-54
Identities = 102/155 (65%), Positives = 121/155 (78%)
Frame = +3
Query: 180 DLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCI 359
DLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCI
Sbjct: 11 DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCI 70
Query: 360 VLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 539
VLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNL
Sbjct: 71 VLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNL 130
Query: 540 FEVYLKPYFMGXLPSDPS*RHLHGSAGGMRAVEFK 644
FEVYLKPYF+ + GGMRAVEFK
Sbjct: 131 FEVYLKPYFLEAYRPIRK-GDIFLVRGGMRAVEFK 164
Score = 54.0 bits (124), Expect = 7e-07
Identities = 37/105 (35%), Positives = 46/105 (43%)
Frame = +1
Query: 574 AYRPIHRDDTFMGPRGACAPSSSKVVETDPSPFCIRGS*YXIHCDGEPINVRXXRXP*ML 753
AYRPI + D F+ RG KVVET PSP+CI IHC+GEPI
Sbjct: 142 AYRPIRKGDIFL-VRGGMRAVEFKVVETHPSPYCIVAPDTVIHCEGEPIKREDEEESLNE 200
Query: 754 SGYYYXXXLSQTXGAN*GXWWXCPWVIPSWSRVLGVXPPPGISFF 888
GY + A P P+ + +GV PP GI +
Sbjct: 201 VGYDDIGGCRKQL-AQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 211 bits (515), Expect = 3e-54
Identities = 102/155 (65%), Positives = 121/155 (78%)
Frame = +3
Query: 180 DLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCI 359
DLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCI
Sbjct: 11 DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCI 70
Query: 360 VLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 539
VLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNL
Sbjct: 71 VLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNL 130
Query: 540 FEVYLKPYFMGXLPSDPS*RHLHGSAGGMRAVEFK 644
FEVYLKPYF+ + GGMRAVEFK
Sbjct: 131 FEVYLKPYFLEAYRPIRK-GDIFLVRGGMRAVEFK 164
Score = 56.8 bits (131), Expect = 1e-07
Identities = 38/105 (36%), Positives = 47/105 (44%)
Frame = +1
Query: 574 AYRPIHRDDTFMGPRGACAPSSSKVVETDPSPFCIRGS*YXIHCDGEPINVRXXRXP*ML 753
AYRPI + D F+ RG KVVETDPSP+CI IHC+GEPI
Sbjct: 142 AYRPIRKGDIFL-VRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNE 200
Query: 754 SGYYYXXXLSQTXGAN*GXWWXCPWVIPSWSRVLGVXPPPGISFF 888
GY + A P P+ + +GV PP GI +
Sbjct: 201 VGYDDIGGCRKQL-AQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 211 bits (515), Expect = 3e-54
Identities = 102/155 (65%), Positives = 121/155 (78%)
Frame = +3
Query: 180 DLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCI 359
DLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCI
Sbjct: 11 DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCI 70
Query: 360 VLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 539
VLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNL
Sbjct: 71 VLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNL 130
Query: 540 FEVYLKPYFMGXLPSDPS*RHLHGSAGGMRAVEFK 644
FEVYLKPYF+ + GGMRAVEFK
Sbjct: 131 FEVYLKPYFLEAYRPIRK-GDIFLVRGGMRAVEFK 164
Score = 56.8 bits (131), Expect = 1e-07
Identities = 38/105 (36%), Positives = 47/105 (44%)
Frame = +1
Query: 574 AYRPIHRDDTFMGPRGACAPSSSKVVETDPSPFCIRGS*YXIHCDGEPINVRXXRXP*ML 753
AYRPI + D F+ RG KVVETDPSP+CI IHC+GEPI
Sbjct: 142 AYRPIRKGDIFL-VRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNE 200
Query: 754 SGYYYXXXLSQTXGAN*GXWWXCPWVIPSWSRVLGVXPPPGISFF 888
GY + A P P+ + +GV PP GI +
Sbjct: 201 VGYDDIGGCRKQL-AQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 211 bits (515), Expect = 3e-54
Identities = 102/155 (65%), Positives = 121/155 (78%)
Frame = +3
Query: 180 DLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCI 359
DLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCI
Sbjct: 11 DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCI 70
Query: 360 VLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 539
VLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNL
Sbjct: 71 VLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNL 130
Query: 540 FEVYLKPYFMGXLPSDPS*RHLHGSAGGMRAVEFK 644
FEVYLKPYF+ + GGMRAVEFK
Sbjct: 131 FEVYLKPYFLEAYRPIRK-GDIFLVRGGMRAVEFK 164
Score = 56.8 bits (131), Expect = 1e-07
Identities = 38/105 (36%), Positives = 47/105 (44%)
Frame = +1
Query: 574 AYRPIHRDDTFMGPRGACAPSSSKVVETDPSPFCIRGS*YXIHCDGEPINVRXXRXP*ML 753
AYRPI + D F+ RG KVVETDPSP+CI IHC+GEPI
Sbjct: 142 AYRPIRKGDIFL-VRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNE 200
Query: 754 SGYYYXXXLSQTXGAN*GXWWXCPWVIPSWSRVLGVXPPPGISFF 888
GY + A P P+ + +GV PP GI +
Sbjct: 201 VGYDDIGGCRKQL-AQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 211 bits (515), Expect = 3e-54
Identities = 102/155 (65%), Positives = 121/155 (78%)
Frame = +3
Query: 180 DLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCI 359
DLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCI
Sbjct: 11 DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCI 70
Query: 360 VLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 539
VLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VEG+TGNL
Sbjct: 71 VLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNL 130
Query: 540 FEVYLKPYFMGXLPSDPS*RHLHGSAGGMRAVEFK 644
FEVYLKPYF+ + GGMRAVEFK
Sbjct: 131 FEVYLKPYFLEAYRPIRK-GDIFLVRGGMRAVEFK 164
Score = 56.8 bits (131), Expect = 1e-07
Identities = 38/105 (36%), Positives = 47/105 (44%)
Frame = +1
Query: 574 AYRPIHRDDTFMGPRGACAPSSSKVVETDPSPFCIRGS*YXIHCDGEPINVRXXRXP*ML 753
AYRPI + D F+ RG KVVETDPSP+CI IHC+GEPI
Sbjct: 142 AYRPIRKGDIFL-VRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNE 200
Query: 754 SGYYYXXXLSQTXGAN*GXWWXCPWVIPSWSRVLGVXPPPGISFF 888
GY + A P P+ + +GV PP GI +
Sbjct: 201 VGYDDIGGCRKQL-AQIKEMVELPLRHPALFKAIGVKPPRGILLY 244
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 123 bits (296), Expect = 1e-27
Identities = 60/101 (59%), Positives = 68/101 (67%)
Frame = +3
Query: 342 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 521
+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VE
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62
Query: 522 GLTGNLFEVYLKPYFMGXLPSDPS*RHLHGSAGGMRAVEFK 644
G+TGNLFEVYLKPYF+ + GGMRAVEFK
Sbjct: 63 GITGNLFEVYLKPYFLEAYRPIRK-GDIFLVRGGMRAVEFK 102
Score = 56.8 bits (131), Expect = 1e-07
Identities = 38/105 (36%), Positives = 47/105 (44%)
Frame = +1
Query: 574 AYRPIHRDDTFMGPRGACAPSSSKVVETDPSPFCIRGS*YXIHCDGEPINVRXXRXP*ML 753
AYRPI + D F+ RG KVVETDPSP+CI IHC+GEPI
Sbjct: 80 AYRPIRKGDIFL-VRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNE 138
Query: 754 SGYYYXXXLSQTXGAN*GXWWXCPWVIPSWSRVLGVXPPPGISFF 888
GY + A P P+ + +GV PP GI +
Sbjct: 139 VGYDDIGGCRKQL-AQIKEMVELPLRHPALFKAIGVKPPRGILLY 182
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 44.0 bits (99), Expect = 7e-04
Identities = 29/82 (35%), Positives = 36/82 (43%)
Frame = +1
Query: 643 KVVETDPSPFCIRGS*YXIHCDGEPINVRXXRXP*MLSGYYYXXXLSQTXGAN*GXWWXC 822
KVVETDPSP+CI IHC+GEPI GY + A
Sbjct: 2 KVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQL-AQIKEMVEL 60
Query: 823 PWVIPSWSRVLGVXPPPGISFF 888
P P+ + +GV PP GI +
Sbjct: 61 PLRHPALFKAIGVKPPRGILLY 82
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,986,604
Number of Sequences: 237096
Number of extensions: 2685688
Number of successful extensions: 7043
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6988
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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