Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_A02
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic ...   214   2e-55
AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM0288...   214   2e-55
AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional...   214   2e-55
AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,...   214   2e-55
AE014298-1761|AAN09307.1|  618|Drosophila melanogaster CG32651-P...    31   2.1  
BT016123-1|AAV37008.1|  591|Drosophila melanogaster LD01328p pro...    29   6.5  
AY268068-1|AAQ56704.1|  591|Drosophila melanogaster UDP-GalNAc:p...    29   6.5  
AF493067-1|AAM62412.1|  591|Drosophila melanogaster UDP-N-acetyl...    29   6.5  
AE014298-2730|AAN09470.1|  591|Drosophila melanogaster CG6394-PB...    29   6.5  
AE014298-2729|AAF48851.1|  591|Drosophila melanogaster CG6394-PA...    29   6.5  

>AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic
           reticulum membranefusion protein protein.
          Length = 799

 Score =  214 bits (522), Expect = 2e-55
 Identities = 128/242 (52%), Positives = 153/242 (63%), Gaps = 7/242 (2%)
 Frame = +3

Query: 180 DLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCI 359
           DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGKRRKETVCI
Sbjct: 8   DLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCI 67

Query: 360 VLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 539
           VLSDD CPDEKIRM            SDVVS+  CP VKYGKRV ILPID+S EG+TGNL
Sbjct: 68  VLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNL 127

Query: 540 FEVYLKPYFMGXLPSDPS*RHLHGS---AGGMRAVEFKSGRNRSITILHPWLLIRNTL*R 710
           FE+YLKPYF    P   S  H+  +      MR +EFK      +T   P+ ++      
Sbjct: 128 FEIYLKPYF----PRGLSAIHMGDNFIVRAAMRPIEFKV----VLTDPEPYCIVAPETVI 179

Query: 711 *TD----*REEXXXALNAVXXLLXXXVVANXWGQLRXLVXLPLGYPFLVQGFGGEXSPRD 878
             D     REE   +LNAV              Q++ +V LPL +P L +  G +  PR 
Sbjct: 180 FCDGDPIKREEEEESLNAV-GYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVK-PPRG 237

Query: 879 FL 884
            L
Sbjct: 238 IL 239



 Score = 46.0 bits (104), Expect = 7e-05
 Identities = 34/101 (33%), Positives = 41/101 (40%)
 Frame = +1

Query: 586 IHRDDTFMGPRGACAPSSSKVVETDPSPFCIRGS*YXIHCDGEPINVRXXRXP*MLSGYY 765
           IH  D F+  R A  P   KVV TDP P+CI      I CDG+PI            GY 
Sbjct: 143 IHMGDNFI-VRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAVGYD 201

Query: 766 YXXXLSQTXGAN*GXWWXCPWVIPSWSRVLGVXPPPGISFF 888
                 +   A        P   PS  + +GV PP GI  +
Sbjct: 202 DIGGCRKQL-AQIKEMVELPLRHPSLFKAIGVKPPRGILMY 241


>AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM02885
           protein.
          Length = 801

 Score =  214 bits (522), Expect = 2e-55
 Identities = 127/240 (52%), Positives = 153/240 (63%), Gaps = 5/240 (2%)
 Frame = +3

Query: 180 DLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCI 359
           DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGKRRKETVCI
Sbjct: 8   DLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCI 67

Query: 360 VLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 539
           VLSDD CPDEKIRM            SDVVS+  CP VKYGKRV ILPID+S EG+TGNL
Sbjct: 68  VLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNL 127

Query: 540 FEVYLKPYFM-GXLPSDPS*RHLHGSAGGMRAVEFKSGRNRSITILHPWLLIRNTL*R*T 716
           FE+YLKPYF+    P       +  +A  MR +EFK      +T   P+ ++        
Sbjct: 128 FEIYLKPYFLEAYRPIHMGDNFIVRAA--MRPIEFKV----VLTDPEPYCIVAPETVIFC 181

Query: 717 D----*REEXXXALNAVXXLLXXXVVANXWGQLRXLVXLPLGYPFLVQGFGGEXSPRDFL 884
           D     REE   +LNAV              Q++ +V LPL +P L +  G +  PR  L
Sbjct: 182 DGDPIKREEEEESLNAV-GYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVK-PPRGIL 239



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 38/105 (36%), Positives = 45/105 (42%)
 Frame = +1

Query: 574 AYRPIHRDDTFMGPRGACAPSSSKVVETDPSPFCIRGS*YXIHCDGEPINVRXXRXP*ML 753
           AYRPIH  D F+  R A  P   KVV TDP P+CI      I CDG+PI           
Sbjct: 139 AYRPIHMGDNFI-VRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNA 197

Query: 754 SGYYYXXXLSQTXGAN*GXWWXCPWVIPSWSRVLGVXPPPGISFF 888
            GY       +   A        P   PS  + +GV PP GI  +
Sbjct: 198 VGYDDIGGCRKQL-AQIKEMVELPLRHPSLFKAIGVKPPRGILMY 241


>AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional
           endoplasmic reticulumATPase TER94 protein.
          Length = 801

 Score =  214 bits (522), Expect = 2e-55
 Identities = 127/240 (52%), Positives = 153/240 (63%), Gaps = 5/240 (2%)
 Frame = +3

Query: 180 DLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCI 359
           DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGKRRKETVCI
Sbjct: 8   DLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCI 67

Query: 360 VLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 539
           VLSDD CPDEKIRM            SDVVS+  CP VKYGKRV ILPID+S EG+TGNL
Sbjct: 68  VLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNL 127

Query: 540 FEVYLKPYFM-GXLPSDPS*RHLHGSAGGMRAVEFKSGRNRSITILHPWLLIRNTL*R*T 716
           FE+YLKPYF+    P       +  +A  MR +EFK      +T   P+ ++        
Sbjct: 128 FEIYLKPYFLEAYRPIHMGDNFIVRAA--MRPIEFKV----VLTDPEPYCIVAPETVIFC 181

Query: 717 D----*REEXXXALNAVXXLLXXXVVANXWGQLRXLVXLPLGYPFLVQGFGGEXSPRDFL 884
           D     REE   +LNAV              Q++ +V LPL +P L +  G +  PR  L
Sbjct: 182 DGDPIKREEEEESLNAV-GYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVK-PPRGIL 239



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 38/105 (36%), Positives = 45/105 (42%)
 Frame = +1

Query: 574 AYRPIHRDDTFMGPRGACAPSSSKVVETDPSPFCIRGS*YXIHCDGEPINVRXXRXP*ML 753
           AYRPIH  D F+  R A  P   KVV TDP P+CI      I CDG+PI           
Sbjct: 139 AYRPIHMGDNFI-VRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNA 197

Query: 754 SGYYYXXXLSQTXGAN*GXWWXCPWVIPSWSRVLGVXPPPGISFF 888
            GY       +   A        P   PS  + +GV PP GI  +
Sbjct: 198 VGYDDIGGCRKQL-AQIKEMVELPLRHPSLFKAIGVKPPRGILMY 241


>AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,
           isoform A protein.
          Length = 801

 Score =  214 bits (522), Expect = 2e-55
 Identities = 127/240 (52%), Positives = 153/240 (63%), Gaps = 5/240 (2%)
 Frame = +3

Query: 180 DLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCI 359
           DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGKRRKETVCI
Sbjct: 8   DLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCI 67

Query: 360 VLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNL 539
           VLSDD CPDEKIRM            SDVVS+  CP VKYGKRV ILPID+S EG+TGNL
Sbjct: 68  VLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNL 127

Query: 540 FEVYLKPYFM-GXLPSDPS*RHLHGSAGGMRAVEFKSGRNRSITILHPWLLIRNTL*R*T 716
           FE+YLKPYF+    P       +  +A  MR +EFK      +T   P+ ++        
Sbjct: 128 FEIYLKPYFLEAYRPIHMGDNFIVRAA--MRPIEFKV----VLTDPEPYCIVAPETVIFC 181

Query: 717 D----*REEXXXALNAVXXLLXXXVVANXWGQLRXLVXLPLGYPFLVQGFGGEXSPRDFL 884
           D     REE   +LNAV              Q++ +V LPL +P L +  G +  PR  L
Sbjct: 182 DGDPIKREEEEESLNAV-GYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVK-PPRGIL 239



 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 38/105 (36%), Positives = 45/105 (42%)
 Frame = +1

Query: 574 AYRPIHRDDTFMGPRGACAPSSSKVVETDPSPFCIRGS*YXIHCDGEPINVRXXRXP*ML 753
           AYRPIH  D F+  R A  P   KVV TDP P+CI      I CDG+PI           
Sbjct: 139 AYRPIHMGDNFI-VRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNA 197

Query: 754 SGYYYXXXLSQTXGAN*GXWWXCPWVIPSWSRVLGVXPPPGISFF 888
            GY       +   A        P   PS  + +GV PP GI  +
Sbjct: 198 VGYDDIGGCRKQL-AQIKEMVELPLRHPSLFKAIGVKPPRGILMY 241


>AE014298-1761|AAN09307.1|  618|Drosophila melanogaster CG32651-PA
           protein.
          Length = 618

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +1

Query: 340 ARKPFASCSQTIIALMRKFG*TVL*ETTFVCVFLMWYPSLRVLQ*NMENESTYCQLMIQL 519
           A+ P  +C +++      F  T+      V    +  P    L  N+ NES  C  +IQL
Sbjct: 434 AKCPDQNCQESLFMYNISFHLTIKHNNWLVKHLELNTPYTFQLDLNVTNESVKCHAVIQL 493

Query: 520 RVLLAIYSKY 549
           + +L  YSKY
Sbjct: 494 QNVLLEYSKY 503


>BT016123-1|AAV37008.1|  591|Drosophila melanogaster LD01328p
           protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 507 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 343
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AY268068-1|AAQ56704.1|  591|Drosophila melanogaster
           UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
           protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 507 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 343
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AF493067-1|AAM62412.1|  591|Drosophila melanogaster
           UDP-N-acetylgalactosamine:
           polypeptideN-acetylgalactosaminyltransferase 2 protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 507 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 343
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AE014298-2730|AAN09470.1|  591|Drosophila melanogaster CG6394-PB,
           isoform B protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 507 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 343
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AE014298-2729|AAF48851.1|  591|Drosophila melanogaster CG6394-PA,
           isoform A protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 507 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 343
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,948,077
Number of Sequences: 53049
Number of extensions: 825362
Number of successful extensions: 2244
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2226
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)