Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_A02
         (891 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   0.70 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.7  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    23   4.9  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    23   4.9  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.5  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 25/105 (23%), Positives = 39/105 (37%)
 Frame = -2

Query: 506 NWQYVDSFSIFH*RTRSDGYHIRKTHTKVVSHNTVHPNFLIRAIIV*EHDANGFLAAFAL 327
           +WQ  D  S+        G  + +  ++++     H    + A IV    ++  L     
Sbjct: 240 HWQ--DQMSLPQMLADKIGKMVNQKFSELIQSKPQHARRKVLAGIVQTKGSDAELICVTT 297

Query: 326 EQDCVTTEELKLLHFGL*KCHD*VVIADCFFDNETVGSVLATEDR 192
              CV+ E L +    L  CH  VV   C  +       L TEDR
Sbjct: 298 GTKCVSGEHLSVSGGALNDCHAEVVARRCLCEYLYKQLELHTEDR 342


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 610  GPRGACAPSSSKVVETDP 663
            GP G   PS+  +V T+P
Sbjct: 986  GPAGRSVPSAELIVRTEP 1003


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 610  GPRGACAPSSSKVVETDP 663
            GP G   PS+  +V T+P
Sbjct: 982  GPAGRSVPSAELIVRTEP 999


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -1

Query: 891 PKKGNPGGRXHPQNPGPGRDNP 826
           P    PG R  P  PG G  NP
Sbjct: 24  PNVPQPGRRPFPTFPGQGPFNP 45


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -1

Query: 891 PKKGNPGGRXHPQNPGPGRDNP 826
           P    PG R  P  PG G  NP
Sbjct: 10  PNVPQPGRRPFPTFPGQGPFNP 31


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 171 LLLSAILFKIYC*NLRTIIIFIT 103
           +LLS+  F++    L TI+IF+T
Sbjct: 1   MLLSSAWFEVIAAVLLTILIFVT 23


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 602 PSWVRGGHARRRV 640
           P+WV G H R RV
Sbjct: 353 PNWVMGNHDRVRV 365


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,956
Number of Sequences: 438
Number of extensions: 5139
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)