Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_P23
         (876 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M35093-1|AAB59612.1|  307|Homo sapiens tumor mucin antigen protein.    33   1.4  
M31823-1|AAA35757.1|  169|Homo sapiens protein ( Human breast ca...    32   2.4  
X52229-1|CAA36478.1|  515|Homo sapiens precursor polypeptide (AA...    31   5.5  
X52228-1|CAA36477.1|  347|Homo sapiens precursor polypeptide (AA...    31   5.5  
M61170-1|AAB53150.1|  475|Homo sapiens polymorphic epithelial mu...    31   5.5  
J05582-1|AAA60019.1| 1255|Homo sapiens mucin protein.                  31   5.5  
J05581-1|AAA59876.1|  475|Homo sapiens polymorphic epithelial mu...    31   5.5  
AL713999-10|CAI95078.1|  475|Homo sapiens mucin 1, cell surface ...    31   5.5  

>M35093-1|AAB59612.1|  307|Homo sapiens tumor mucin antigen protein.
          Length = 307

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 215 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 373
           LG+T P  HD+  AP  KP   +TA  P  Q  TSA           P A  VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAQGVTSAPETRPPPGSTAPPAHGVT 159


>M31823-1|AAA35757.1|  169|Homo sapiens protein ( Human breast
           carcinoma-associated antigen DF3 mRNA, 5' end. ).
          Length = 169

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 215 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 373
           LG+T P  HD+  AP  KP   +TA  P     TSA           P+A  VT
Sbjct: 117 LGSTTPPAHDVTSAPDNKPAPGSTA--PQAHGVTSAPDTRPAPGSTAPQAHGVT 168


>X52229-1|CAA36478.1|  515|Homo sapiens precursor polypeptide (AA
           -21 to 494) protein.
          Length = 515

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +2

Query: 215 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 373
           LG+T P  HD+  AP  KP   +TA  P     TSA           P A  VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTRPPPGSTAPPAHGVT 159


>X52228-1|CAA36477.1|  347|Homo sapiens precursor polypeptide (AA
           -21 to 326) protein.
          Length = 347

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +2

Query: 215 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 373
           LG+T P  HD+  AP  KP   +TA  P     TSA           P A  VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTRPPPGSTAPPAHGVT 159


>M61170-1|AAB53150.1|  475|Homo sapiens polymorphic epithelial mucin
           protein.
          Length = 475

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +2

Query: 215 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 373
           LG+T P  HD+  AP  KP   +TA  P     TSA           P A  VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTRPAPGSTAPPAHGVT 159


>J05582-1|AAA60019.1| 1255|Homo sapiens mucin protein.
          Length = 1255

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +2

Query: 215 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 373
           LG+T P  HD+  AP  KP   +TA  P     TSA           P A  VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTRPAPGSTAPPAHGVT 159


>J05581-1|AAA59876.1|  475|Homo sapiens polymorphic epithelial mucin
           protein.
          Length = 475

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +2

Query: 215 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 373
           LG+T P  HD+  AP  KP   +TA  P     TSA           P A  VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTRPAPGSTAPPAHGVT 159


>AL713999-10|CAI95078.1|  475|Homo sapiens mucin 1, cell surface
           associated protein.
          Length = 475

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +2

Query: 215 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAXXXXXXXXXXXPEAEKVT 373
           LG+T P  HD+  AP  KP   +TA  P     TSA           P A  VT
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTRPAPGSTAPPAHGVT 159


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,266,419
Number of Sequences: 237096
Number of extensions: 1208790
Number of successful extensions: 6594
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6593
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)