Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_P20
         (862 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0535 + 4234282-4235082                                           30   2.1  
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521...    29   3.6  
10_08_0352 + 17091637-17091945,17092049-17096617,17096975-170971...    29   6.3  
05_05_0381 + 24531622-24532918,24535334-24535468,24535592-245357...    29   6.3  
03_02_0101 - 5623661-5623669,5623756-5624408,5624504-5624640,562...    28   8.3  
02_03_0184 - 16109854-16110261,16110342-16110565,16111600-161117...    28   8.3  

>11_01_0535 + 4234282-4235082
          Length = 266

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 374 WRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLP 481
           W  + +A FLY C  LG  A   RLW    +  + P
Sbjct: 220 WTPAAWAFFLYTCVNLGPRARDQRLWYISKFGDKYP 255


>04_01_0399 -
           5214183-5214206,5215437-5215502,5219537-5219635,
           5219746-5219817,5219918-5220491,5220575-5220687,
           5220842-5220941,5221059-5221181,5221268-5221335,
           5221461-5221610,5221715-5221858,5222097-5222288,
           5222710-5222794,5222892-5223043,5223138-5223296,
           5223552-5223605,5223698-5223836,5223955-5224088,
           5224200-5225117
          Length = 1121

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 316 LYSACRWCLWRIPVPFQSHVEDFYIRHIFVLVFGVGYHSW 435
           L S CRWCL     P Q+++ED +    F+ V   G  SW
Sbjct: 695 LTSHCRWCL--TGTPLQNNLEDLFSLLCFLHVEPWGDASW 732


>10_08_0352 + 17091637-17091945,17092049-17096617,17096975-17097187,
            17097266-17097494,17097857-17097981
          Length = 1814

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 22/64 (34%), Positives = 31/64 (48%)
 Frame = -1

Query: 382  SPPHGFEKEQVSSINTTDMQNKEQNHVFSTQSSMVSFSAEGGTWGGAVXLAGHWRRFRTI 203
            SPP   ++E +    TT    KE+   FS+  S  S S + G  GGA+  A  +RRF + 
Sbjct: 1678 SPPQPPKREIIRV--TTKAIVKEKASAFSSVGSSSS-SGKSGAGGGALNAAALFRRFNSS 1734

Query: 202  PTKP 191
               P
Sbjct: 1735 APVP 1738


>05_05_0381 +
           24531622-24532918,24535334-24535468,24535592-24535764,
           24536029-24536239,24536287-24536554,24536664-24536814,
           24536938-24537246
          Length = 847

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 281 GLFLC*GRYMGRCSLSGRSLASVSYNTHEASCXLWGG 171
           GL LC  R +G CS +  + A++S       C +W G
Sbjct: 372 GLQLCRRRCLGNCSCTAYANANLSAPPGRRGCVMWTG 408


>03_02_0101 -
           5623661-5623669,5623756-5624408,5624504-5624640,
           5626032-5626609
          Length = 458

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 335 GVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 442
           G   GY  L+  +W T + A+   L + LG+  G H
Sbjct: 97  GAAAGYQLLWLLLWATVMGALVQLLSARLGVATGKH 132


>02_03_0184 -
           16109854-16110261,16110342-16110565,16111600-16111717,
           16111847-16112203,16113363-16113683
          Length = 475

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 572 IFCGAYDDHGPN 537
           IFCG +D HGPN
Sbjct: 116 IFCGVFDGHGPN 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,876,461
Number of Sequences: 37544
Number of extensions: 422485
Number of successful extensions: 957
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)