Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_P20
         (862 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    27   0.73 
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   2.2  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    25   3.0  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    25   3.0  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    25   3.9  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    25   3.9  
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    24   5.2  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    23   9.0  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    23   9.0  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    23   9.0  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   9.0  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   9.0  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   9.0  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   9.0  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 protein.
          Length = 961

 Score = 27.1 bits (57), Expect = 0.73
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = -1

Query: 451  PKSVRASCDTQPRTQVQKYGEYRSPPHGFEKEQVSSINTTD-MQNKEQNHVFSTQSSMVS 275
            P S+   CD +P +       YR      +++Q       +  Q ++QN + +TQ  + +
Sbjct: 877  PHSMHTDCDYEPESHKLLAENYRQQHQQQQQQQQQQQQQHEHEQQQQQNSMLATQQRLEA 936

Query: 274  FSAEGGT 254
               + GT
Sbjct: 937  SQMDQGT 943


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +2

Query: 206 CTKPTPMTCQXDCTAPCTSLSRERDHG 286
           C   TP T    C APC    R  D G
Sbjct: 655 CELDTPSTAIRHCPAPCRCYIRPEDTG 681


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -2

Query: 462 DLCAQSLCAPAVIPNPEHKYKNMAN 388
           D  AQ+ CAP V PN E   K   N
Sbjct: 70  DYPAQAQCAPGVTPNTEPASKPSPN 94


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -2

Query: 462 DLCAQSLCAPAVIPNPEHKYKNMAN 388
           D  AQ+ CAP V PN E   K   N
Sbjct: 70  DYPAQAQCAPGVTPNTEPASKPSPN 94


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -2

Query: 462 DLCAQSLCAPAVIPNPEHKYKNMAN 388
           D  AQ+ CAP V PN E   K   N
Sbjct: 70  DYPAQAQCAPGVTPNTEPAPKPSPN 94


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -2

Query: 462 DLCAQSLCAPAVIPNPEHKYKNMAN 388
           D  AQ+ CAP V PN E   K   N
Sbjct: 70  DYPAQAQCAPGVTPNTEPAPKPSPN 94


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 462 DLCAQSLCAPAVIPNPE 412
           D  AQ+ CAP V PN E
Sbjct: 70  DYPAQAQCAPGVTPNTE 86


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 462 DLCAQSLCAPAVIPNPEHKYKNMAN 388
           D  +Q+ CAP V PN E   K   N
Sbjct: 70  DYPSQAQCAPGVTPNTEPAPKPSPN 94


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 462 DLCAQSLCAPAVIPNPEHKYKNMAN 388
           D  +Q+ CAP V PN E   K   N
Sbjct: 70  DYPSQAQCAPGVTPNTEPAPKPSPN 94


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 462 DLCAQSLCAPAVIPNPEHKYKNMAN 388
           D  +Q+ CAP V PN E   K   N
Sbjct: 70  DYPSQAQCAPGVTPNTEPAPKPSPN 94


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 340 NTTDMQNKEQNHVFSTQSSMVSFSAEGGTWGGA 242
           NT  + +++Q+H  S      S S  GG+ G A
Sbjct: 198 NTETIGDEQQSHAVSPNQRGFSASGGGGSGGSA 230


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 340 NTTDMQNKEQNHVFSTQSSMVSFSAEGGTWGGA 242
           NT  + +++Q+H  S      S S  GG+ G A
Sbjct: 198 NTETIGDEQQSHAVSPNQRGFSASGGGGSGGSA 230


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 340 NTTDMQNKEQNHVFSTQSSMVSFSAEGGTWGGA 242
           NT  + +++Q+H  S      S S  GG+ G A
Sbjct: 198 NTETIGDEQQSHAVSPNQRGFSASGGGGSGGSA 230


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 340 NTTDMQNKEQNHVFSTQSSMVSFSAEGGTWGGA 242
           NT  + +++Q+H  S      S S  GG+ G A
Sbjct: 198 NTETIGDEQQSHAVSPNQRGFSASGGGGSGGSA 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,039
Number of Sequences: 2352
Number of extensions: 15430
Number of successful extensions: 36
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)