Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP02_F_P19
         (898 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   3.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   5.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   5.0  

>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 328 TPATKTMSAPPPTRSLSLQCIPSAAENYRSAKTDLIEE 441
           TPA+ T+S  PPT +L  Q + +  E     ++D + E
Sbjct: 25  TPASPTLST-PPTLNLMEQILLAKIEKQNLHESDDLHE 61


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 130 TRPTASSNPPST*KQSRRPASGTRCAAE 213
           T+PT S  PP+   +  R A   R A++
Sbjct: 730 TQPTMSQMPPTAQPRMERLAEAVRTASQ 757


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 368 LVGGGADMVLVAGVRSRTAERSALLM 291
           +VGGGA   +VAG  S  +    LL+
Sbjct: 73  VVGGGAARAVVAGRLSEVSNWKVLLL 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,021
Number of Sequences: 438
Number of extensions: 2577
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)